Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3994 |
Symbol | |
ID | 6483603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3881999 |
End bp | 3883144 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642739254 |
Product | lipopolysaccharide 1,2-N-acetylglucosaminetransferase |
Protein accession | YP_002042964 |
Protein GI | 194443168 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAA AAATCATATT TACTGTTACT CCTATATTTT CAATTCCTCC TCGTGGTGCG GCTGCGGTAG AAACCTGGAT TTACCAGGTT GCAAAACGAC TATCAATACC GAGTGCTATT GCTTGTATAA AGAATGCTGG CTATCCTGAA TATAATAAAA TAAACGATAA TTGTGATATT CATTACATTG GGTTTAGTAA AGTTTATAAG CGTCTTTTTC AGAAATGGAC TCGTCTCGAC CCACTACCCT ATTCCCAGCG CGTCCTTAAT ATTAGAGATA AAGTGACTAC CCAGGAAGAT AGCGTCATTG TTATTCATAA TAGTATGAAA CTGTATCGGC AGATCAGAGA GCGCAATCCG AATGCAAAAC TGGTTATGCA CATGCATAAC GCATTTGAAC CAGAACTTCC TGATAACGAT GCAAAAATTA TCGTGCCCAG TCAGTTTCTT AAAGCGTTTT ATGAAGAAAG ATTGCCTGCC GCTGCTGTTA GTATTGTGCC TAATGGTTTT TGTGCTGAGA CTTATAAAAG AAACCCACAA GATAATCTTC GTCAGCAATT AAATATTGCG GAAGATGCCA CCGTTCTCTT ATATGCCGGG AGAATTTCGC CTGATAAAGG CATCCTGTTG CTTTTGCAGG CGTTCAAACA ATTACGTACC TTAAGAAGTA ATATTAAACT TGTCGTTGTT GGCGACCCTT ATGCAAGCCG CAAGGGTGAA AAAGCAGAGT ATCAAAAGAA AGTACTGGAC GCCGTAAAAG AGATTGGAAC GGATTGTATT ATGGCAGGGG GGCAATCTCC CGACCAGATG CATAACTTCT ATCATATAGC CGATCTGGTT ATTGTGCCAT CTCAGGTTGA AGAAGCATTT TGCATGGTAG CTGTAGAAGC GATGGCAGCA GGAAAAGCGG TTCTTGCCAG CAAAAAAGGG GGGATTAGCG AATTTGTGTT AGATGGCATA ACGGGCTATC ACCTCGCAGA GCCTATGTCG AGCGACAGTA TAATTAATGA TATTAAACGT GCGCTTGCTG ATAAGGAACG CCACCAGATT GCCGAAAAAG CAAAATCCCT GGTGTTTTCA AAATACAGTT GGGAAAATGT AGCGCAGCGT TTCGAGGAAC AAATGAAAAG CTGGTTTGAT AAGTGA
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Protein sequence | MIKKIIFTVT PIFSIPPRGA AAVETWIYQV AKRLSIPSAI ACIKNAGYPE YNKINDNCDI HYIGFSKVYK RLFQKWTRLD PLPYSQRVLN IRDKVTTQED SVIVIHNSMK LYRQIRERNP NAKLVMHMHN AFEPELPDND AKIIVPSQFL KAFYEERLPA AAVSIVPNGF CAETYKRNPQ DNLRQQLNIA EDATVLLYAG RISPDKGILL LLQAFKQLRT LRSNIKLVVV GDPYASRKGE KAEYQKKVLD AVKEIGTDCI MAGGQSPDQM HNFYHIADLV IVPSQVEEAF CMVAVEAMAA GKAVLASKKG GISEFVLDGI TGYHLAEPMS SDSIINDIKR ALADKERHQI AEKAKSLVFS KYSWENVAQR FEEQMKSWFD K
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