| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3990 |
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| Symbol | rfaD |
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| ID | 6484414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3877754 |
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| End bp | 3878686 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642739250 |
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| Product | ADP-L-glycero-D-mannoheptose-6-epimerase |
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| Protein accession | YP_002042960 |
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| Protein GI | 194442628 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.413285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCG TTACCGGCGG CGCGGGCTTT ATCGGCAGCA ATATCGTTAA GGCCCTGAAT
GATAAAGGTA TCACCGATAT TCTGGTGGTG GATAACCTGA AAGACGGCAC CAAGTTTGTA
AACCTGGTGG ATCTGAACAT TGCTGACTAT ATGGATAAGG AAGATTTCCT GATCCAGATT
ATGTCCGGAG AAGAGCTCGG CGATATCGAA GCTATTTTCC ATGAAGGCGC CTGCTCTTCC
ACCACCGAGT GGGACGGCAA GTATATGATG GATAATAACT ATCAATACTC CAAAGAGCTG
CTGCACTATT GTCTTGAGCG CGAAATCCCG TTCCTCTATG CCTCTTCTGC CGCCACCTAT
GGCGGTCGCA CGTCTGATTT CATCGAATCG CGCGAATACG AAAAACCGCT TAACGTTTAC
GGCTATTCTA AATTCCTGTT TGATGAATAT GTGCGCCAGA TCCTGCCAGA AGCGAACTCG
CAGATTGTCG GTTTCCGCTA TTTCAACGTC TATGGACCAC GTGAAGGCCA TAAAGGCAGC
ATGGCAAGCG TGGCATTTCA TCTGAATACA CAGTTAAACA ACGGCGAAAG CCCGAAACTG
TTTGAAGGCA GCGAAAACTT CAAGCGCGAC TTCGTTTACG TGGGCGATGT GGCCGCCGTT
AACCTGTGGT TCCTGGAAAG CGGCAAGTCC GGCATCTTTA ACCTGGGCAC AGGCCGTGCG
GAATCTTTCC AGGCCGTCGC CGACGCGACG CTGGCATACC ATAAAAAAGG CAGCATTGAA
TACATTCCGT TCCCGGATAA GCTGAAAGGT CGCTATCAGG CGTTTACGCA GGCGGATTTA
ACCAATCTGC GCAACGCGGG CTACGACAAA CCCTTTAAGA CCGTCGCCGA AGGCGTCACG
GAGTATATGG CCTGGCTGAA CCGCGACTCG TAA
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| Protein sequence | MIIVTGGAGF IGSNIVKALN DKGITDILVV DNLKDGTKFV NLVDLNIADY MDKEDFLIQI
MSGEELGDIE AIFHEGACSS TTEWDGKYMM DNNYQYSKEL LHYCLEREIP FLYASSAATY
GGRTSDFIES REYEKPLNVY GYSKFLFDEY VRQILPEANS QIVGFRYFNV YGPREGHKGS
MASVAFHLNT QLNNGESPKL FEGSENFKRD FVYVGDVAAV NLWFLESGKS GIFNLGTGRA
ESFQAVADAT LAYHKKGSIE YIPFPDKLKG RYQAFTQADL TNLRNAGYDK PFKTVAEGVT
EYMAWLNRDS
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