| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3988 |
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| Symbol | tdh |
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| ID | 6485288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3875320 |
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| End bp | 3876345 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642739248 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_002042958 |
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| Protein GI | 194443916 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGT TATCCAAACT GAAAGCGGAA GAGGGCATCT GGATGACCGA CGTTCCGGAA
CCGGAAGTCG GCCATAACGA TTTGCTGATT AAAATCCGTA AAACAGCCAT CTGCGGCACT
GACGTTCACA TCTATAACTG GGATGACTGG TCGCAAAAAA CCATCCCGGT TCCGATGGTC
GTGGGGCATG AATATGTCGG CGAAGTGGTC GGCATCGGTC AGGAAGTGAA AGGCTTTAAA
ATCGGCGATC GCGTCTCCGG CGAAGGTCAT ATCACCTGTG GTCATTGCCG CAACTGCCGT
GGTGGTCGTA CTCACCTGTG TCGCAACACC ACCGGCGTGG GCGTCAACCG TCCCGGCTGC
TTCGCGGAAT ATCTGGTCAT CCCGGCGTTC AATGCGTTTA AAATCCCGGA TAACATTTCT
GATGATTTAG CCTCTATTTT CGACCCGTTT GGTAATGCGG TGCATACGGC GCTGTCTTTC
GATCTGGTCG GCGAAGATGT ACTGGTATCG GGGGCGGGGC CAATCGGCGT AATGGCCGCC
GCGGTGGCGA AACATGTTGG CGCGCGTCAT GTGGTGATTA CTGACGTCAA TGAATACCGT
CTGGAGCTGG CGCGCAAAAT GGGCGTCACC CGCGCGGTCA ACGTCGCGAA AGAGAGCCTG
AACGACGTCA TGGCGGAGCT GGGAATGACC GAAGGGTTCG ATGTGGGTCT GGAGATGTCC
GGCGCGCCGC CGGCGTTTCG TACCATGCTG GACACCATGA ATCACGGCGG TCGTATTGCG
ATGCTGGGGA TTCCGCCATC AGATATGTCT ATCGACTGGA CAAAAGTCAT CTTTAAGGGC
TTGTTCATTA AAGGTATTTA TGGTCGTGAG ATGTTCGAAA CGTGGTACAA AATGGCGGCG
CTGATCCAGT CCGGTCTGGA TCTGTCACCG ATTATCACCC ATCGTTTCTC TATTGATGAT
TTCCAGAAAG GTTTTGATGC CATGCGTTCA GGCCAGTCAG GAAAAGTTAT TCTGAGCTGG
GATTAA
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| Protein sequence | MKALSKLKAE EGIWMTDVPE PEVGHNDLLI KIRKTAICGT DVHIYNWDDW SQKTIPVPMV
VGHEYVGEVV GIGQEVKGFK IGDRVSGEGH ITCGHCRNCR GGRTHLCRNT TGVGVNRPGC
FAEYLVIPAF NAFKIPDNIS DDLASIFDPF GNAVHTALSF DLVGEDVLVS GAGPIGVMAA
AVAKHVGARH VVITDVNEYR LELARKMGVT RAVNVAKESL NDVMAELGMT EGFDVGLEMS
GAPPAFRTML DTMNHGGRIA MLGIPPSDMS IDWTKVIFKG LFIKGIYGRE MFETWYKMAA
LIQSGLDLSP IITHRFSIDD FQKGFDAMRS GQSGKVILSW D
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