| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3986 |
|---|
| Symbol | |
|---|
| ID | 6482590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 3872842 |
|---|
| End bp | 3873804 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642739246 |
|---|
| Product | divergent polysaccharide deacetylase |
|---|
| Protein accession | YP_002042956 |
|---|
| Protein GI | 194445745 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2861] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCTCAGT TTCGTCGCTC CATTCTCACG CTGGCCACTT TGCTGGCGTT TGCACATCCC
GTTTTCGCTG GCAAGCTCGC CATCGTGATT GATGATTTTG GCTATCGCCC GCACACGGAA
AACCAGGTTC TGGCGCTGCC GCCAAACATC TCCGTCGCCG TACTGCCCAA CGCGCCGCAC
GCGCGCGAAA TGGCAACTAA AGCGCACAAT AGCGGGCATG AGGTGTTAAT CCATCTGCCG
ATGGCGCCGC TAAGCAAACA GCCGCTGGAG AAGGATACGC TGCGACCAGA TATGAGCAGC
GATGAGATCG AGCGCATTAT CCGCGAGGCG GTAAACAACG TGCCGTATGC CGTCGGGCTT
AATAACCACA TGGGCAGCGC AATGACCTCC AGCCTGTTCG GTATGCAAAA AGTTATGCAG
GCGCTGGAAC ATTACAATCT CTATTTTCTC GACAGCATGA CGATTGGCAA TAGCCAGGCG
ATGCGCGCGG CATCCGGTAC GGGTGTGAAA GTGATCAAGC GCAAAGTGTT CCTCGACGAT
ACGCAAAACG AGGCGGATAT CCGTCGTCAG TTTAATCGCG CTATCGAACT GGCCCGTCGC
AACGGTTCCG CTATCGCGAT TGGTCATCCA CATCCCGCAA CGGTTCGCGT GCTGCAACAG
ATGGTTTATC GCCTGCCGGC GGATATCACC CTGGTACGTC CAGGCAGCCT GCTCAACGAA
CCGCAGGTAG ATACGTCCCG ACCTGGTGTG ACGCCGCAGA AAATTGACGC GCCGCGCAAT
CCCTTTCGCG GCGTGAAGAT GTGCAAGCCG AAAAAACCGC TGCAACCGGT CTACGCTACG
CGCTTTTTCA GCGTCATCGG CGAGAGCATT ACGCAAAGTT CCGTGGTTGT CTGGTTTCAG
CATCAGTGGC AAGGCTGGGG GAAAATCGCC GCGCCTAAAA ACGTGAGCGC TAAGACAGAT
TGA
|
|---|
| Protein sequence | MPQFRRSILT LATLLAFAHP VFAGKLAIVI DDFGYRPHTE NQVLALPPNI SVAVLPNAPH
AREMATKAHN SGHEVLIHLP MAPLSKQPLE KDTLRPDMSS DEIERIIREA VNNVPYAVGL
NNHMGSAMTS SLFGMQKVMQ ALEHYNLYFL DSMTIGNSQA MRAASGTGVK VIKRKVFLDD
TQNEADIRRQ FNRAIELARR NGSAIAIGHP HPATVRVLQQ MVYRLPADIT LVRPGSLLNE
PQVDTSRPGV TPQKIDAPRN PFRGVKMCKP KKPLQPVYAT RFFSVIGESI TQSSVVVWFQ
HQWQGWGKIA APKNVSAKTD
|
|---|
| |