| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3978 |
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| Symbol | |
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| ID | 6483119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3865162 |
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| End bp | 3866472 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642739238 |
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| Product | putative glucarate transporter |
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| Protein accession | YP_002042948 |
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| Protein GI | 194446563 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.776069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAA TAATAAAGCG CACAAAAGTG CGTCATACCA TTCTTATATT TTTATTTCTT
GCTACCGTAT TTAATTATGC GGATCGCGCA ACTCTATCCG TAGTTGCCCC AATAATGAGT
AAAGAATTAG GTTTTGATCC GGAAGCGATG GGCCTGGCCT TCTCCTCATT TGGTATTGCC
TATGTCATTA TGCAACTACC CGGCGGTTGG CTATTAGACC GCTACGGTTC ACGACTGGTT
TACGGTTGCG CATTGATTGG CTGGTCGTTA GTAACCATGT TTCAGGGAAC GATCTATTTG
TATGGCAGCC CATTAATTGT ACTGGTTATT CTACGTCTGC TGATGGGCGC GATTGAAGCG
CCTGCCTTTC CGGCGAACAG TCGTTTAAGC GTACAATGGT TTCCCAATAA TGAACGAGGT
TTCGTTACTT CAGTTTATCA GGCTGCGCAA TATATCTCGC TGGGCATTAT CACCCCGCTA
ATGACGATCA TTCTGCATAA TTTAAGCTGG CATTTTGTCT TCTATTATAT TGGCGCTATT
GGCGTGATGC TCGGTATATT CTGGTTAATG AAAGTCAAAG ATCCGATGCA CCACCCAAAA
GTTAATCAAG CGGAAATTGA CTATATTCGT AGCGGTGGTG GCGAGCCCTC TCTGGGCTGT
AAAAAGGAGC CGCAGAAAAT AACGTTCGCG CAGATTAAAA CCGTCTGTGT TAACCGGATG
ATGATCGGTG TTTACATCGG GCAATTCTGC GTCACCTCTA TCACCTGGTT CTTCCTGACC
TGGTTCCCGA CCTACCTGTA CCAGGCGAAA GGCATGTCGA TTCTGAAAGT CGGTTTTGTG
GCCAGTATTC CAGCCATTGC CGGTTTTATT GGCGGCCTGC TCGGCGGCGT GTTCTCCGAC
TGGCTACTCA AACGCGGCTA TAGCCTTACC GTCGCGCGGA AACTGCCTGT TATCTGCGGT
ATGTTGCTCT CTTGCGTAAT TGTGATCGCC AACTACACCT CTTCAGAATT TGTGGTCATT
GCGGCGATGA GTCTGGCCTT TTTTGCCAAA GGGTTTGGTA ACCTGGGCTG GTGCGTACTC
AGCGACACCT CGCCGAAGGA AGTTCTGGGT ATTGCCGGCG GCGTATTTAA CATGTGCGGC
AATATGGCAA GCATCGTTAC GCCGCTGGTC ATCGGCGTGA TTCTTGCCAA TACTCAGTCG
TTCGACTTTG CCATTTTATA CGTTGGCTCG ATGGGACTTA TTGGTCTCAT TTCATATCTG
TTTATCGTCG GCCCGCTGGA TCGCATCACG CTGACATCAT CCGCAGCCTG A
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| Protein sequence | MNTIIKRTKV RHTILIFLFL ATVFNYADRA TLSVVAPIMS KELGFDPEAM GLAFSSFGIA
YVIMQLPGGW LLDRYGSRLV YGCALIGWSL VTMFQGTIYL YGSPLIVLVI LRLLMGAIEA
PAFPANSRLS VQWFPNNERG FVTSVYQAAQ YISLGIITPL MTIILHNLSW HFVFYYIGAI
GVMLGIFWLM KVKDPMHHPK VNQAEIDYIR SGGGEPSLGC KKEPQKITFA QIKTVCVNRM
MIGVYIGQFC VTSITWFFLT WFPTYLYQAK GMSILKVGFV ASIPAIAGFI GGLLGGVFSD
WLLKRGYSLT VARKLPVICG MLLSCVIVIA NYTSSEFVVI AAMSLAFFAK GFGNLGWCVL
SDTSPKEVLG IAGGVFNMCG NMASIVTPLV IGVILANTQS FDFAILYVGS MGLIGLISYL
FIVGPLDRIT LTSSAA
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