| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3971 |
|---|
| Symbol | lldP |
|---|
| ID | 6483572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 3858348 |
|---|
| End bp | 3860003 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642739231 |
|---|
| Product | L-lactate permease |
|---|
| Protein accession | YP_002042941 |
|---|
| Protein GI | 194444820 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1620] L-lactate permease |
|---|
| TIGRFAM ID | [TIGR00795] L-lactate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 0.737729 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCT GGCAACAAAA CTATGACCCG GCGGGTAATA TCTGGCTTTC CAGCCTGATC
GCATCGCTCC CAATCCTGTT CTTTTTCTTC GCCCTGATTA AACTCAAGCT GAAAGGCTAC
GTTGCCGCTT CGTGGACGGT GGTTATCGCG CTCGCCGTCG CTCTGCTGTT CTATAAAATG
CCGGTCGATC ACGCGCTGGC ATCGGTCGTG TATGGCTTCT TCTACGGGCT ATGGCCGATT
GCCTGGATAA TCATCGCCGC GGTCTTCGTC TATAAAATTT CGGTCAAGAC CGGGCAATTC
GACATCATCC GTTCATCAAT ACTCTCCATT ACCCCGGACC AGCGTCTGCA AATGCTGATT
GTCGGCTTCT GCTTCGGCGC GTTTCTTGAA GGCGCAGCAG GTTTTGGCGC GCCGGTGGCG
ATAACCGCCG CGCTGCTGGT GGGCCTGGGC TTTAATCCGC TGTATGCGGC AGGGCTGTGC
CTGATTGTAA ACACCGCGCC AGTCGCCTTT GGCGCGATGG GGATCCCGAT TCTGGTTGCC
GGACAGGTCA CGGGCCTGGA CAGCTTTGAA ATCGGTCAGA TGGTCGGTCG TCAGCTACCG
TTCCTGACCA TTATCGTCCT GTTCTGGATT ATGGCGATTA TGGACGGCTG GCGCGGCGTG
AAAGAAACCT GGCCTGCGGT GATGGTCGCT GGCGGCTCGT TTGCTATCGC CCAGTATCTC
AGCTCCAACT TTATCGGGCC GGAACTGCCG GACATCATCT CTTCACTGGT GTCTCTGGTG
TGTCTGACGC TGTTCCTCAA ACGCTGGCAG CCGATACGCA TCTTCCGCTT CGGCGATATG
GGCGCGTCGC AGGTCGATCA GACGCTGGCC CGCACCCGCT ATACGACAGG GCAAATTGTT
CGCGCCTGGT CGCCGTTTCT GTTCCTGACC GCCACGGTCA CTCTCTGGAG CGTACCGCCG
TTTAAAGCGT TGTTTGCCCC CGGCGGCGCG CTGTATGACT GGGTAATTAA CGTTCCGGTA
CCGTATCTCG ATAAACTGGT CGCCCGTATG CCGCCGGTCG TACACGAAGC GACCGCTTAC
GCGGCGGTGT ATAAATTTGA CTGGTTCTCC GCCACCGGCA CGGCGATCCT GTTTGCCGCG
CTGTTGTCTA TCGTCTGGCT GAAAATGAAG CCCTCAGCCG CAATCCAGAC CTTTGGCAGC
ACGCTGAAAG AGCTGGCGTT GCCGATTTAC TCCATCGGCA TGGTGCTGGC GTTCGCGTTT
ATCTCGAACT ATTCCGGGCT TTCCTCCACG CTGGCGTTAG CGCTGGCGCA CACCGGCAGC
GCCTTCACGT TCTTCTCGCC GTTCCTCGGC TGGCTGGGGG TATTCCTGAC CGGGTCCGAC
ACCTCATCTA ACGCGCTGTT TGCCTCTCTA CAGGCTACCG CGGCGCAGCA AATCGGCGTC
TCTGATGTGC TGATGGTGGC GGCGAACACC ACTGGAGGCG TAACCGGGAA GATGATCTCG
CCGCAGTCTA TCGCCATCGC CTGCGCGGCG GTGGGACTGG TAGGGAAAGA GTCCGATCTG
TTCCGTTTTA CCGTCAAACA CAGCCTGATC TTCACCTGTA TGGTGGGCGT GATCACTACG
CTTCAGGCCT ATGTTTTAAC CTGGATGATT CCGTGA
|
|---|
| Protein sequence | MNLWQQNYDP AGNIWLSSLI ASLPILFFFF ALIKLKLKGY VAASWTVVIA LAVALLFYKM
PVDHALASVV YGFFYGLWPI AWIIIAAVFV YKISVKTGQF DIIRSSILSI TPDQRLQMLI
VGFCFGAFLE GAAGFGAPVA ITAALLVGLG FNPLYAAGLC LIVNTAPVAF GAMGIPILVA
GQVTGLDSFE IGQMVGRQLP FLTIIVLFWI MAIMDGWRGV KETWPAVMVA GGSFAIAQYL
SSNFIGPELP DIISSLVSLV CLTLFLKRWQ PIRIFRFGDM GASQVDQTLA RTRYTTGQIV
RAWSPFLFLT ATVTLWSVPP FKALFAPGGA LYDWVINVPV PYLDKLVARM PPVVHEATAY
AAVYKFDWFS ATGTAILFAA LLSIVWLKMK PSAAIQTFGS TLKELALPIY SIGMVLAFAF
ISNYSGLSST LALALAHTGS AFTFFSPFLG WLGVFLTGSD TSSNALFASL QATAAQQIGV
SDVLMVAANT TGGVTGKMIS PQSIAIACAA VGLVGKESDL FRFTVKHSLI FTCMVGVITT
LQAYVLTWMI P
|
|---|
| |