| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3963 |
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| Symbol | |
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| ID | 6483249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3847748 |
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| End bp | 3849664 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642739223 |
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| Product | PTS system mannitol-specific transporter subunit EIICBA |
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| Protein accession | YP_002042933 |
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| Protein GI | 194442311 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2213] Phosphotransferase system, mannitol-specific IIBC component
[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
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| TIGRFAM ID | [TIGR00851] PTS system, mannitol-specific IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.303673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.484856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCG ATATTAAGAT CAAAGTGCAA AGCTTTGGTC GATTCCTCAG CAATATGGTG
ATGCCTAATA TCGGCGCGTT TATCGCGTGG GGTATTATCA CCGCATTATT TATTCCAACA
GGGTGGTTGC CTAACGAAAC GCTGGCGAAA CTGGTTGGTC CGATGATCAC CTACCTGCTG
CCGCTGCTCA TCGGTTATAC CGGCGGTCGT CTGGTTGGCG GCGAACGCGG CGGCGTAGTG
GGCGCTATCA CTACCATGGG CGTTATTGTC GGCGCGGATA TGCCGATGTT CCTCGGCTCG
ATGATCGCCG GTCCATTAGG CGGCTACTGC ATTAAGAAAT TCGACAGTTG GGTAGACGGT
AAGATCAAAT CCGGTTTTGA GATGCTGGTG AACAACTTCT CCGCTGGCAT CATCGGTATG
ATCCTCGCCA TCCTGGCGTT CCTCGGTATT GGTCCGGCGG TTGAAGTCCT GTCCAAAATT
CTGGCGGCGG GCGTTAACTT CATGGTGGCG CACGATATGC TGCCGCTGGC GTCCATTTTT
GTTGAACCGG CGAAAATCCT GTTCCTCAAT AACGCGATTA ACCACGGCAT CTTCTCACCG
CTGGGTATCC AGCAGTCCCA TGAGATGGGT AAATCCATCT TCTTCCTGAT TGAAGCTAAC
CCGGGTCCGG GGATGGGCGT CCTGCTGGCG TACATGTTCT TCGGTCGCGG CAGCGCTAAA
CAGTCTGCGG GCGGCGCGGC GATTATCCAC TTCCTGGGCG GTATCCACGA AATTTACTTC
CCGTACGTGC TGATGAACCC ACGTCTGATC CTGGCCGTTA TCCTTGGCGG TATGACTGGC
GTATTCACCC TGACCATCCT GAACGGCGGT CTGGTTTCTC CGGCTTCTCC TGGTTCCATT
CTGGCCGTAC TGGCGATGAC GCCAAAAGGC GCTTACTTCG CTAACATCGC TGCCATCGTG
GCGGCAATGG CGGTCTCCTT CGTGGTTTCT GCAATTCTGC TGAAAACCAG CAAAGTGAAA
GAAGAAGATG ACATTGAAGC GGCCACCCGT CGTATGCATG ACATGAAAGC GGAATCTAAA
GGCGCCTCTC CGCTGGCGGC TGGCGACGTG ACCAACGACC TGAGCCATGT GCGTAAAATC
ATCGTGGCTT GCGATGCCGG TATGGGTTCC AGCGCGATGG GCGCAGGGGT ACTGCGTAAG
AAAGTACAGG ATGCGGGCCT GAGCCAGATC TCCGTCACCA ACAGCGCCAT TAACAATCTG
CCGCCGGATG TGGATCTGGT CATTACTCAC CGTGACCTTA CCGAGCGCGC GATGCGTCAG
GTACCGCAGG CGCAGCATAT TTCGCTGACC AACTTCCTGG ATAGCGGCCT GTACACCAGC
CTGACCGAAC GTCTGGTTGC CGCACAGCGC CACAATACTA ATGAAGAGAA AGTACGCGAC
CATCTGAAAG ACAGCTTTGA GGAGGGTGAT AACAACCTGT TCAAACTGGG TGCGGAGAAT
ATCTTCCTGG GCCGTAAAGC CGCTAACAAA GAAGAGGCGA TTCGCTTTGC CGGTGAACAA
CTGGTGAAAG GCGGCTATGT TGAGCCGGAA TACGTCGAAG CGATGCTGGA CCGCGAAAAG
CTGACGCCGA CTTACCTCGG TGAATCCATC GCAGTTCCGC ACGGCACGGT GGAAGCTAAA
GATCGCGTGC TGAAAACCGG CGTGGTGTTC TGCCAGTATC CGGAAGGCGT ACGCTTCGGT
GAAGAAGAAG ACGATATTGC CCGTCTGGTC ATTGGTATCG CCGCACGTAA CAATGAGCAC
ATCCAGGTCA TCACTAGCCT GACCAACGCG CTGGATGATG AATCCGTGAT CGAACGTCTG
GCGCACACCA CCAGCGTGGA TGAAGTGCTG GAACTGCTGG CAGGTAAAAA AGCTTAA
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| Protein sequence | MSSDIKIKVQ SFGRFLSNMV MPNIGAFIAW GIITALFIPT GWLPNETLAK LVGPMITYLL
PLLIGYTGGR LVGGERGGVV GAITTMGVIV GADMPMFLGS MIAGPLGGYC IKKFDSWVDG
KIKSGFEMLV NNFSAGIIGM ILAILAFLGI GPAVEVLSKI LAAGVNFMVA HDMLPLASIF
VEPAKILFLN NAINHGIFSP LGIQQSHEMG KSIFFLIEAN PGPGMGVLLA YMFFGRGSAK
QSAGGAAIIH FLGGIHEIYF PYVLMNPRLI LAVILGGMTG VFTLTILNGG LVSPASPGSI
LAVLAMTPKG AYFANIAAIV AAMAVSFVVS AILLKTSKVK EEDDIEAATR RMHDMKAESK
GASPLAAGDV TNDLSHVRKI IVACDAGMGS SAMGAGVLRK KVQDAGLSQI SVTNSAINNL
PPDVDLVITH RDLTERAMRQ VPQAQHISLT NFLDSGLYTS LTERLVAAQR HNTNEEKVRD
HLKDSFEEGD NNLFKLGAEN IFLGRKAANK EEAIRFAGEQ LVKGGYVEPE YVEAMLDREK
LTPTYLGESI AVPHGTVEAK DRVLKTGVVF CQYPEGVRFG EEEDDIARLV IGIAARNNEH
IQVITSLTNA LDDESVIERL AHTTSVDEVL ELLAGKKA
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