| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3939 |
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| Symbol | xylA |
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| ID | 6485548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3818818 |
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| End bp | 3820140 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642739199 |
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| Product | xylose isomerase |
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| Protein accession | YP_002042909 |
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| Protein GI | 194444823 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.619988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCTT ATTTTGACCA ACTCGATCGT GTTCGCTATG AAGGCCCTCA ATCGACTAAC
CCGCTGGCAT TTCGTCATTA CAATCCCGAC GAGCTGGTTT TAGGTAAACG TATGGAAGAT
CACCTGCGTT TCGCGGCCTG TTACTGGCAT ACCTTCTGCT GGAACGGCGC GGATATGTTT
GGTGTAGGCG CGTTTAATCG TCCGTGGCAG CAACCGGGCG AAGCGCTGGA GCTGGCGAAA
CGCAAAGCGG ACGTGGCGTT TGAATTTTTC CACAAACTGA ATGTGCCTTT TTATTGCTTC
CATGACGTGG ATGTGTCGCC GGAAGGCGCG TCGTTGAAAG AATATAAAAA CAACTTCGCG
CAGATGGTGG ATGTGCTGGC GGCGAAACAG GAGCAGAGCG GCGTAAAACT GCTGTGGGGA
ACGGCGAACT GCTTTACCAA CCCGCGCTAT GGCGCAGGCG CCGCCACTAA CCCGGACCCG
GAAGTCTTTA GCTGGGCAGC GACGCAAGTG GTTACGGCAA TGAACGCCAC GCATAAACTG
GGCGGCGAAA ATTACGTCCT GTGGGGCGGG CGCGAAGGTT ATGAAACGTT GCTGAATACC
GATCTGCGCC AGGAACGCGA ACAGATTGGC CGCTTTATGC AAATGGTGGT CGAGCACAAA
CATAAAATGG GCTTCCAGGG CACGCTGCTG ATTGAACCGA AACCGCAGGA ACCGACAAAA
CATCAGTATG ATTATGACGT TGCAACGGTC TATGGCTTCC TCAAACAGTT CGGCCTGGAA
AAAGAGATCA AAGTGAACAT TGAGGCGAAC CACGCGACGC TGGCGGGCCA TTCGTTCCAC
CATGAAATCG CGACCGCTAT CGCGCTGGGT ATTTTTGGCT CCGTTGACGC CAACCGCGGT
GATGCGCAAC TGGGCTGGGA TACCGATCAG TTCCCGATTA GCGTTGAAGA GAACGCGCTG
GTGATGTACG AAATCCTGAA AGCGGGCGGA TTCACGACGG GCGGTCTCAA CTTCGACGCC
AAAGTTCGTC GCCAGAGCAC CGATAAATAC GATCTGTTCT ACGGTCATAT CGGCGCGATG
GATACGATGG CGTTGTCGCT GAAAATCGCC GCGCGTATGG TTGAAGACGG CGAGCTGGAT
AAACGCGTGG CGAAGCGCTA TGCCGGCTGG AATGGCGAGC TGGGTCAGCA GATTCTGAAA
GGACAACTCT CCTTAGGCGA ACTGGCGCAG TATGCGGAGC AGCATAATCT GGCGCCAGTA
CATCAAAGCG GTCATCAGGA GCTGTTAGAA AATCTGGTTA ACCGTTATCT GTTTGATAAA
TAA
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| Protein sequence | MQAYFDQLDR VRYEGPQSTN PLAFRHYNPD ELVLGKRMED HLRFAACYWH TFCWNGADMF
GVGAFNRPWQ QPGEALELAK RKADVAFEFF HKLNVPFYCF HDVDVSPEGA SLKEYKNNFA
QMVDVLAAKQ EQSGVKLLWG TANCFTNPRY GAGAATNPDP EVFSWAATQV VTAMNATHKL
GGENYVLWGG REGYETLLNT DLRQEREQIG RFMQMVVEHK HKMGFQGTLL IEPKPQEPTK
HQYDYDVATV YGFLKQFGLE KEIKVNIEAN HATLAGHSFH HEIATAIALG IFGSVDANRG
DAQLGWDTDQ FPISVEENAL VMYEILKAGG FTTGGLNFDA KVRRQSTDKY DLFYGHIGAM
DTMALSLKIA ARMVEDGELD KRVAKRYAGW NGELGQQILK GQLSLGELAQ YAEQHNLAPV
HQSGHQELLE NLVNRYLFDK
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