Gene SNSL254_A3929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3929 
Symbol 
ID6484341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp3811145 
End bp3811357 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content47% 
IMG OID642739189 
Productmajor cold shock protein 
Protein accessionYP_002042899 
Protein GI194443289 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGTA AAATGACTGG TATCGTAAAA TGGTTCAACG CTGATAAAGG CTTCGGCTTT 
ATTACTCCTG ATGACGGTTC TAAAGACGTG TTCGTACACT TCTCCGCTAT TCAGAACGAT 
GGTTACAAAT CTCTGGACGA AGGTCAGAAA GTTTCCTTCA CCATCGAAAG CGGCGCTAAA 
GGCCCGGCAG CTGGCAACGT AACCAGCCTG TAA
 
Protein sequence
MSGKMTGIVK WFNADKGFGF ITPDDGSKDV FVHFSAIQND GYKSLDEGQK VSFTIESGAK 
GPAAGNVTSL