| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3916 |
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| Symbol | |
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| ID | 6482341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3798822 |
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| End bp | 3801350 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642739176 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_002042886 |
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| Protein GI | 194444158 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.834184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATGGA CGCATCTTCC TCTGGGCAAT AAGACCTCGC GTTTCACGCA GTCTGCGCTT
GCGCTGATGA TAGCGGGTAC GCTCCCCGCG TATGCGGGAA CATTTAACCC GCGCTTTCTG
GAGGATGTGC CGGGTATTGA TCAGCACGTT GACCTTTCAA TGTATGAATC CAATAAAGCT
GAACACCTGC CAGGTAAATA CCGCGTCTCG GTGGTGGTCA ACGAAAAAAA AATGGAGTCT
CGCACCCTGG AGTTTAAGGC AGCGACAGAG GCGCAGCGCG CAAAAATGGG TGAATCCCTG
GTGCCGTGCT TAAGCCGCGT GCAGCTTGAA GATATGGGCG TGCGTATTGA TAGCTTCCCG
GCTCTGAAAA TGGCCCCGCC TGAAGCCTGT GTTGCTTTTG ACGACATTAT TCCCCAGGCC
GCCAGCCATT TCGACTTTGC AGACCAGACC CTGATCATGA GCTTCCCGCA GGCTGCGATG
AAGCAGACAG CGCGCGGTAC GGTGCCAGAA TCGCAGTGGG ACGAAGGGGT GAATGCCCTG
CTGGTGGATT ATAACTTTTC CGGCAGCAAC GCCAGCTATG ACGCACACGA CAGTGAAACC
AGCTACAACA GCGACAGCTA CTATCTGAAT CTGCGCAGCG GTATGAACCT GGGGGCATGG
CGGTTACGTA ACTATAGCAC CTGGACGCGA AACGACGGTA ACAACACATG GGATAACATT
GGCACATCTC TAAGCCGTGC CATTGTGCCG CTGAAATCAC AGCTGACGTT GGGGGATACC
TCCACCGCCG GTGATATTTT TGACAGCGTT CAGATGCGCG GTGTGCAGTT AACTTCCGAC
GAAGAGATGC TGCCTGACAG CCAGCGCGGG TTTGCGCCCG TCATCCGGGG TATTGCCAAA
AGTAACGCCG AAGTTACCGT TGAGCAGAAC AACTACGTTA TTTACCGTAC GTTTGTTCAG
CCGGGTGCGT TTGAAATTAA CGACCTGTAT CCAACCTCAA ACAGCGGCGA CCTGACGGTC
ACCATTAAAG AATCGGACGG CAGTGAGCAG AAGTTCGTTC AGCCGTTCTC CTCGGTGGCG
CTCCTCCAGC GTGAAGGCCA TCTCAAATAC AGCCTTTCCG CCGGGGAATA CCGTGCCGGG
AACTATAACA GCGCCGAGCC GAAATTCGGG CAGCTTGATG CCATGTACGG CCTGCCGTAT
GGCTTTACCG TTTACGGTGG TGCGATCTTC TCTGACGACT ATTACTCGCT GGCGGGAGGA
TTAGGTAAAA ACTTCGGTTA TATCGGCGCG ATCTCCATCG ATGTAACCCA GGCAAAAAGC
AAGCTGGCAA ATGAGGAGAA TTCGGAAGGT CAGTCTTATC GTTTCCTCTA CTCCAAGAGC
TTTAACAGCG GTACAGATTT CCGTCTGCTG GGTTACAAGT ATTCGACCAG CGGCTATTAC
ACCTTCCAGG AAGCGACGGA TGTGCGCAGC GATGCGGACA GCTCTTATAG CCAGTACCAC
AAACGTAGTC AGATTCAGGG CAACGTGACG CAGCAACTGG GCGCCTGGGG CTCGGTCTAT
TTTAACGTCA CGCAGCAGGA CTACTGGAAC GATGAAGGTA AACAGCGTTC GCTGAATGCC
GGTTATAACG GCCGTATTGG CCGCGTGAAC TACAGCGTTG CTTACACCTG GACGAAAAGC
CCGGAGTGGG ATGAGAGCGA TCGTTTACTG TCATTCTCCA TGTCGATTCC ACTGGGACGC
GTGTGGAGTA ACTACCACCT CACGACCGAT CAGCATGGCC GAACCAACCA GCAGTTAGGG
GTGAGCGGCA CCGCGCTGGA AGACCACAAC CTGAACTATA GTGTGCAGGA AGGCTACGGC
AGCAACGGCG TGGGTAACAG CGGCAGCGTG AACCTGGATT ACCAGGGCGG CGTGGGTAGC
GCCAGCCTGG GTTACAACTA CAACCGTGAC GGCCAGCAGG TGAACTACGG TTTGCGCGGC
GGTGTGATAG CCCATAGCGA AGGTATCACT CTTTCTCAAC CGCTGGGTGA ATCCATGGCC
ATTATCTCCG CGCCGGGCGC GCGCGGCGCG CACGTGATCA ACAACGGTGG TGTGGAAGTG
GACTGGATGG GTAATGCGGT CGTGCCTTAC CTTACTCCGT ACCGTGAAAC GGAAGTCTCA
CTGCGAAGCG ACAGCCTGAA CAACCAGGTT GACCTGGATA CCGCCTCCGT CAACGTAGTG
CCGACACGCG GCGCGATTGT TCGTGCCCGC TTCGATACCC GAGTGGGCTA TCGCGTGCTG
ATGAATCTGA CGCAGGCCAA TGGCAAAGCG GTGCCGTTTG GTGCTACCGC CACGCTGCTG
GATACCACAA AAGAGTTCAG CAGCATTGTG GGTGAAGACG GTCAGCTTTA TATCAGCGGG
ATGCCGGAGA AAGGTGCCCT TCAGGTGAAC TGGGGTAAAG ACCAGGCACA GCAATGCCGC
GTGGCGTTTA CGCTGCCGGA ACAACAGGAT AATACCGGCG TGGTGATGGC GAATGCCGTC
TGCCGGTAA
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| Protein sequence | MTWTHLPLGN KTSRFTQSAL ALMIAGTLPA YAGTFNPRFL EDVPGIDQHV DLSMYESNKA
EHLPGKYRVS VVVNEKKMES RTLEFKAATE AQRAKMGESL VPCLSRVQLE DMGVRIDSFP
ALKMAPPEAC VAFDDIIPQA ASHFDFADQT LIMSFPQAAM KQTARGTVPE SQWDEGVNAL
LVDYNFSGSN ASYDAHDSET SYNSDSYYLN LRSGMNLGAW RLRNYSTWTR NDGNNTWDNI
GTSLSRAIVP LKSQLTLGDT STAGDIFDSV QMRGVQLTSD EEMLPDSQRG FAPVIRGIAK
SNAEVTVEQN NYVIYRTFVQ PGAFEINDLY PTSNSGDLTV TIKESDGSEQ KFVQPFSSVA
LLQREGHLKY SLSAGEYRAG NYNSAEPKFG QLDAMYGLPY GFTVYGGAIF SDDYYSLAGG
LGKNFGYIGA ISIDVTQAKS KLANEENSEG QSYRFLYSKS FNSGTDFRLL GYKYSTSGYY
TFQEATDVRS DADSSYSQYH KRSQIQGNVT QQLGAWGSVY FNVTQQDYWN DEGKQRSLNA
GYNGRIGRVN YSVAYTWTKS PEWDESDRLL SFSMSIPLGR VWSNYHLTTD QHGRTNQQLG
VSGTALEDHN LNYSVQEGYG SNGVGNSGSV NLDYQGGVGS ASLGYNYNRD GQQVNYGLRG
GVIAHSEGIT LSQPLGESMA IISAPGARGA HVINNGGVEV DWMGNAVVPY LTPYRETEVS
LRSDSLNNQV DLDTASVNVV PTRGAIVRAR FDTRVGYRVL MNLTQANGKA VPFGATATLL
DTTKEFSSIV GEDGQLYISG MPEKGALQVN WGKDQAQQCR VAFTLPEQQD NTGVVMANAV
CR
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