| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3871 |
|---|
| Symbol | |
|---|
| ID | 6482760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 3745647 |
|---|
| End bp | 3746966 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642739136 |
|---|
| Product | anaerobic C4-dicarboxylate transporter |
|---|
| Protein accession | YP_002042847 |
|---|
| Protein GI | 194444246 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
|---|
| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0593006 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 85 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTGGA CGGAATTATG TTTTATCCTT GTGGCCCTGA TGATAGGCGC CAGGATCGGC
GGCGTATTTT TAGGGATGGT CGGCGGGTTA GGCGTCGGCG TGATGGTTTT TATTTTTGGC
CTGACGCCTT CTACGCCACC GATTGATGTT ATTCTGATTA TTCTTTCTGT TGTCCTGGCG
GCCGCTTCTT TACAGGCCTC CGGCGGGCTG GATTTACTGG TCAAACTGGC GGAAAAAATT
CTGCGTCGCC ACCCGCGTTA CATTACGTTA TTAGCGCCGT TTATCTGTTA TATCTTCACT
TTTATGTCAG GAACGGGGCA TGTCGTTTAT AGCTTGCTAC CGGTTATTTC TGAAGTCGCA
CGGGATTCAG GTATTCGACC GGAACGTCCT TTATCTATTT CCGTTATCGC ATCGCAACAG
GCGATCACCG CCAGTCCTAT ATCTGCCGCC ATGGCGGCGA TGATTGGTTT AATGGCGCCG
TTGGGCGTCT CTATTTCAAC CATAATGATG ATTTGCGTGC CCGCCACGTT AATCGGTGTA
GCGATGGGGG CAATAGCGAC CTTTAATAAA GGAAAAGAGT TAAAAGACGA TCCGGAATAT
CAACGTCGGC TTGCTGAAGG GTTAATTAAA CCTGCGCAGA AAAAAAGTAA AAATACGGTG
GTCACTTCGC GCGCCAAATT GTCGGTGGCG TTATTTCTGA CCAGCGCGAT CGTTATCGTT
CTGTTAGGAC TGATTCCGGC GCTGCGGCCC ATGGTGGAAA CAGCGAAAGG GCTACAACCG
CTTTCGATGT CCGCCGCTAT CCAGATTACG ATGCTCTCTT TTGCCTGCCT GATTGTGTTG
TTATGCCGAC CGCAGGTCGA TCAAATTATC AGCGGTACGG TATTTCGGGC GGGCGCGCTG
GCGATTGTCT GCGCCTTCGG CCTGGCCTGG ATGAGTGAGA CGTTCGTGAA TGGTCATATC
GCGTTGATTA AGGCAGAAGT GCAAACTCTA TTGCAACAGC ATACCTGGCT TATCGCCATT
ATGATGTTTT TCGTGTCCGC TATGGTCAGC AGCCAGGCGG CAACGACGTT AATTCTGTTG
CCGCTGGGGC TGGCGTTAGG GTTGCCCGCT TATGCATTAA TCGGCTCCTG GCCTGCCGTT
AACGGCTATT TCTTTATTCC GGTGGCGGGA CAGTGTCTGG CGGCGCTGGC GTTTGACGAC
ACCGGTACGA CGCGTATCGG CAAATATGTG CTTAACCATA GTTTTATGCG TCCGGGATTA
GTTAACGTGA TTGTCTCGGT CATTGTCGGG CTGTTAATAG GAAAAATGGT TCTGGCCTGA
|
|---|
| Protein sequence | MFWTELCFIL VALMIGARIG GVFLGMVGGL GVGVMVFIFG LTPSTPPIDV ILIILSVVLA
AASLQASGGL DLLVKLAEKI LRRHPRYITL LAPFICYIFT FMSGTGHVVY SLLPVISEVA
RDSGIRPERP LSISVIASQQ AITASPISAA MAAMIGLMAP LGVSISTIMM ICVPATLIGV
AMGAIATFNK GKELKDDPEY QRRLAEGLIK PAQKKSKNTV VTSRAKLSVA LFLTSAIVIV
LLGLIPALRP MVETAKGLQP LSMSAAIQIT MLSFACLIVL LCRPQVDQII SGTVFRAGAL
AIVCAFGLAW MSETFVNGHI ALIKAEVQTL LQQHTWLIAI MMFFVSAMVS SQAATTLILL
PLGLALGLPA YALIGSWPAV NGYFFIPVAG QCLAALAFDD TGTTRIGKYV LNHSFMRPGL
VNVIVSVIVG LLIGKMVLA
|
|---|
| |