Gene SNSL254_A3775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3775 
SymbolompR 
ID6486332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3640891 
End bp3641610 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content56% 
IMG OID642739042 
Productosmolarity response regulator 
Protein accessionYP_002042753 
Protein GI194444248 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones104 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAGA ATTATAAGAT TCTGGTGGTT GATGACGATA TGCGTCTGCG GGCGCTACTG 
GAACGTTATC TGACCGAGCA GGGCTTCCAG GTTCGAAGCG TCGCTAACGC CGAGCAGATG
GATCGTCTGC TGACCCGTGA ATCTTTCCAT CTCATGGTAC TGGATTTAAT GCTGCCAGGT
GAAGATGGTC TGTCGATTTG TCGTCGCCTG CGTAGTCAAA GTAATCCAAT GCCGATCATT
ATGGTCACGG CGAAGGGTGA AGAGGTTGAC CGTATCGTCG GGCTGGAAAT CGGTGCCGAT
GACTACATTC CTAAACCGTT TAACCCGCGC GAGCTGTTGG CGCGTATTCG CGCCGTGTTG
CGTCGTCAGG CAAACGAACT GCCCGGCGCG CCGTCGCAGG AAGAGGCCGT TATCGCGTTC
GGTAAGTTTA AACTGAACCT CGGTACGCGC GAGATGTTCC GTGAAGATGA ACCGATGCCG
CTGACCAGCG GGGAGTTTGC GGTACTGAAA GCGTTAGTCA GCCATCCGCG CGAGCCGCTC
TCTCGCGATA AGCTGATGAA TCTGGCCCGT GGTCGCGAGT ATTCCGCGAT GGAACGCTCC
ATCGACGTCC AGATCTCCCG CCTGCGCCGT ATGGTGGAAG AAGATCCGGC GCATCCGCGT
TATATTCAGA CCGTATGGGG CCTGGGCTAC GTCTTCGTAC CGGACGGTTC TAAAGCATGA
 
Protein sequence
MQENYKILVV DDDMRLRALL ERYLTEQGFQ VRSVANAEQM DRLLTRESFH LMVLDLMLPG 
EDGLSICRRL RSQSNPMPII MVTAKGEEVD RIVGLEIGAD DYIPKPFNPR ELLARIRAVL
RRQANELPGA PSQEEAVIAF GKFKLNLGTR EMFREDEPMP LTSGEFAVLK ALVSHPREPL
SRDKLMNLAR GREYSAMERS IDVQISRLRR MVEEDPAHPR YIQTVWGLGY VFVPDGSKA