| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3685 |
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| Symbol | rpsK |
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| ID | 6485319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3566987 |
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| End bp | 3567376 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642738957 |
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| Product | 30S ribosomal protein S11 |
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| Protein accession | YP_002042668 |
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| Protein GI | 194443473 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0100] Ribosomal protein S11 |
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| TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00109954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 94 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAGG CACCAGTTCG CGCACGTAAA CGTGTAAGAA AACAAGTCTC TGACGGCGTG
GCTCATATCC ATGCTTCTTT CAACAACACC ATCGTGACTA TTACCGATCG TCAGGGTAAT
GCGCTGGGTT GGGCAACAGC CGGTGGTTCC GGTTTCCGTG GTTCTCGCAA ATCCACTCCG
TTTGCAGCTC AGGTTGCAGC AGAGCGTTGC GCTGACGCCG TGAAAGAATA CGGTATCAAG
AATCTGGAAG TTATGGTTAA AGGTCCGGGT CCAGGCCGCG AATCTACTAT TCGTGCTCTG
AACGCCGCTG GTTTCCGCAT CACTAATATT ACTGATGTGA CTCCGATCCC TCATAACGGT
TGTCGTCCGC CGAAAAAACG TCGCGTATAA
|
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| Protein sequence | MAKAPVRARK RVRKQVSDGV AHIHASFNNT IVTITDRQGN ALGWATAGGS GFRGSRKSTP
FAAQVAAERC ADAVKEYGIK NLEVMVKGPG PGRESTIRAL NAAGFRITNI TDVTPIPHNG
CRPPKKRRV
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