Gene SNSL254_A3677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3677 
Symbolsun 
ID6483085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3560477 
End bp3561766 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content54% 
IMG OID642738949 
Product16S rRNA methyltransferase B 
Protein accessionYP_002042660 
Protein GI194443414 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC AAAACAATTT ACGTAGTCTG GCAGCACAGG CCGTTGAACA GGTCGTCGAG 
CAGGGACAAT CATTAAGTAA TGTGCTCCCG CCGCTGCAAC AAAAAGTCGC CGATAAAGAC
AAAGCGCTAC TTCAGGAGCT GTGCTTTGGC GTACTGCGCA CCCTTTCACA GCTGGAATGG
CTAATCAATA AGCTGATGTC TCGTCCAATG ACCGGCAAGC AGCGTACAGT GCATTACTTA
ATTATGGTCG GCTTTTATCA GTTGCTGTAC ACCCGCGTTC CTCCCCATGC GGCGCTGGCT
GAAACCGTTG AAGGCGCGGT CGCCATCAAA CGTCCGCAGT TGAAAGGGTT AATTAACGGC
GTCCTGCGCC AGTTCCAGCG CCAGCAGGAA ACGTTGCTTA ATGAGTTTGC GACCAGCGAT
GCGCGCTTTT TACATCCAGG TTGGCTGGTA AAGCGTTTGC AAAATGCTTA CCCCACACAG
TGGCAACACA TTATTGAAGC GAATAACCAG CGTCCACCGA TGTGGCTACG TGTAAATCGT
ACACACCACA CCCGCGACGG TTGGCTTGGC TTACTTGAAG ACGCAGGCAT GAAGGGATAT
CCCCATCCCG ATTATCCCGA CGCTGTACGT CTGGAAACGC CAGCTCCGGT ACATGCTTTA
CCCGGTTTTG CTGAGGGTTG GGTAACTGTC CAGGATGCCT CTGCGCAGGG ATGTGCGGTT
TTTCTCGCTC CTCAGAACGG TGAGCACATT TTAGACTTGT GCGCCGCGCC CGGCGGTAAA
ACCACGCATA TTCTCGAAGT GGCCCCTGAA GCAGACGTGT TGGCAGTTGA TATTGATGAA
CAACGACTCT CCCGCGTTTA CGACAACCTA AAGCGTCTTG GGATGAAAGC GACAGTTAAA
CAAGGGGATG GACGTTATCC CTCCCAATGG TGCGGCGAGC AGCAGTTTGA CCGTATTCTG
CTGGATGCGC CCTGCTCCGC AACCGGCGTC ATTCGCCGTC ATCCAGATAT CAAATGGCTG
CGTCGCGATC GCGATATCGC GGAACTGGCG CAATTACAGG CGGAAATTCT TGATGCCGTC
TGGCCGCGCC TGAAGCCCGG CGGGACGCTG GTTTACGCCA CCTGTTCCGT ACTGCCGGAA
GAAAACCGCG ATCAGATCAA AGCCTTTTTG CAACGCACTC CCGATGCCGC GCTCAGCGAA
ACGGGAACAC CTGATCAGCC AGGACAGCAA AATCTGCCGG GCGGCGAAGA AGGTGATGGG
TTCTTTTACG CTAAGCTAAT CAAGAAGTGA
 
Protein sequence
MKKQNNLRSL AAQAVEQVVE QGQSLSNVLP PLQQKVADKD KALLQELCFG VLRTLSQLEW 
LINKLMSRPM TGKQRTVHYL IMVGFYQLLY TRVPPHAALA ETVEGAVAIK RPQLKGLING
VLRQFQRQQE TLLNEFATSD ARFLHPGWLV KRLQNAYPTQ WQHIIEANNQ RPPMWLRVNR
THHTRDGWLG LLEDAGMKGY PHPDYPDAVR LETPAPVHAL PGFAEGWVTV QDASAQGCAV
FLAPQNGEHI LDLCAAPGGK TTHILEVAPE ADVLAVDIDE QRLSRVYDNL KRLGMKATVK
QGDGRYPSQW CGEQQFDRIL LDAPCSATGV IRRHPDIKWL RRDRDIAELA QLQAEILDAV
WPRLKPGGTL VYATCSVLPE ENRDQIKAFL QRTPDAALSE TGTPDQPGQQ NLPGGEEGDG
FFYAKLIKK