| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3617 |
|---|
| Symbol | |
|---|
| ID | 6482218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 3504287 |
|---|
| End bp | 3504904 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642738892 |
|---|
| Product | L(+)-tartrate dehydratase subunit beta |
|---|
| Protein accession | YP_002042609 |
|---|
| Protein GI | 194443765 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain |
|---|
| TIGRFAM ID | [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.256375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAA AAATCCTGAC TACGCCAATT AAAGATGAAG ATTTAGCGGA TATTAAGGCT
GGCGATATTA TTTATCTCAA TGGTCATATT GTTACCTGCC GTGACGTAGC CCATCGCCGT
TTAATTGAAG GTGGTCGCGA GCTTCCGGTA GATGTTCGCG GCGGCGCTAT TTTACACGCT
GGCCCCATTG TCCGCCCAAT TAAAGGCGAA GACGATAAGT TTGAAATGGT CTCCGTTGGA
CCAACCACCA GCATGCGTAT GGAGAAATTC GAAAAAGAGT TTATTGCGCA AACCGGCGTG
AAATTAATTG TGGGTAAAGG CGGTATGGGT AAAGGTACCG AAGAGGGCTG TGCTGAACAC
AAAGCGCTGC ACTGCGTATT CCCTGCCGGT TGTGCGGTTG TAGCCGCCGT GTGCGTGGAA
GAAATTGAAG ATGCCCAATG GCGCGATCTG GGGATGCCGG AAACGCTGTG GGTCTGTCGG
GTTAAAGAGT TTGGCCCGCT GATTGTTTCT ATTGATACCC ATGGGAATAA TCTGTTTGAA
CAGAACAAAA TTATTTTTAA TCAGCGTAAA GAGATCGTCG CTGATGAAAT ATGCCAGAAC
GTAAGTTTCA TCAAATAA
|
|---|
| Protein sequence | MTKKILTTPI KDEDLADIKA GDIIYLNGHI VTCRDVAHRR LIEGGRELPV DVRGGAILHA
GPIVRPIKGE DDKFEMVSVG PTTSMRMEKF EKEFIAQTGV KLIVGKGGMG KGTEEGCAEH
KALHCVFPAG CAVVAAVCVE EIEDAQWRDL GMPETLWVCR VKEFGPLIVS IDTHGNNLFE
QNKIIFNQRK EIVADEICQN VSFIK
|
|---|
| |