Gene SNSL254_A3609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3609 
Symbol 
ID6482543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp3495602 
End bp3496726 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content55% 
IMG OID642738884 
ProductATPase, AFG1 family 
Protein accessionYP_002042601 
Protein GI194443955 
COG category[R] General function prediction only 
COG ID[COG1485] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000949089 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGCT TTTCCCCTAC ATCGCGTTAT CTCCAGGCAC TCAACGAAGG CACCCATCAG 
CCTGACGACG TACAGAAAGA GGCGGTCGAC CGTCTGGAAA CCCTTTATCA GGCGCTCACC 
GCGAAAAAAT CGTCGGCTAC GCCACCCGGC GGACTGATAG CGCGACTGGG GAAATTATTA 
GGCAAAAACG AACCGGACGC GCAAATACCG GTTCGCGGGC TGTATATGTG GGGGGGCGTG 
GGTCGCGGCA AAACCTGGCT CATGGATCTC TTCTACCACA GCCTGCCGGG TGAGCGAAAA 
TTACGCCTGC ATTTTCATCG GTTTATGCTG CGCGTGCATG AAGAACTTAC CGCGCTACAG 
GGACAGATCG ATCCGTTAGA CATTATTGCC GATCGGTTTA AAACCGAGAC GGACGTACTG 
TGTTTCGATG AGTTTTTCGT CACCGATATT ACCGACGCCA TGCTGCTGGG CGGTTTAATG 
AAAGCGCTGT TTGCACGCGG CATTACGCTG GTCGCGACCT CCAATATTCC GCCGGATGAA 
CTCTACCGCA ACGGTTTGCA ACGCGCCCGC TTCCTGCCGG CTATCGATGC CATTAAACAG 
CACTGCGACA TTATGAATGT GGACGCCGGC GTCGATTACC GGCTGCGGAC GCTGACGCAG 
GCCCATTTAT GGCTAACGCC GCTTAATGAT GAAACCCGGC GGCAAATGGA TAAACTGTGG 
CTGGCGTTAG CGGGGGCCGC GCGCGAGCAC GCTCCGACGC TGGAAATCAA TCATCGCTCT 
TTATCCACCC TGGGCGTTGA AAACCAAACG CTAGCGGTCT CTTTCGCTAC GCTGTGCGTC 
GAGGCCCGCA GCCAGCATGA TTACATTGCG CTCTCAAGGT TATTTCACAC GGTTCTGCTG 
TTTGACGTGC CGGTCATGAC GCCGCTGATG GAGAACGAAG CGCGCCGCTT TATTGCGCTG 
GTGGATGAGT TTTACGAGCG CCACGTTAAG CTGGTGGTCA GCGCCGCCGC ACCGTTATAT 
GAAATTTATC AGGGGGAACG GCTCAAGTTT GAATTTCAGC GCTGTCTGTC ACGCCTGCAA 
GAGATGCAGA GTGCGGAGTA CCTCAAGCGG GAGCATATGC CGTAA
 
Protein sequence
MQSFSPTSRY LQALNEGTHQ PDDVQKEAVD RLETLYQALT AKKSSATPPG GLIARLGKLL 
GKNEPDAQIP VRGLYMWGGV GRGKTWLMDL FYHSLPGERK LRLHFHRFML RVHEELTALQ 
GQIDPLDIIA DRFKTETDVL CFDEFFVTDI TDAMLLGGLM KALFARGITL VATSNIPPDE 
LYRNGLQRAR FLPAIDAIKQ HCDIMNVDAG VDYRLRTLTQ AHLWLTPLND ETRRQMDKLW 
LALAGAAREH APTLEINHRS LSTLGVENQT LAVSFATLCV EARSQHDYIA LSRLFHTVLL 
FDVPVMTPLM ENEARRFIAL VDEFYERHVK LVVSAAAPLY EIYQGERLKF EFQRCLSRLQ 
EMQSAEYLKR EHMP