Gene SNSL254_A3600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3600 
Symbol 
ID6482748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3487835 
End bp3488524 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content58% 
IMG OID642738876 
ProductN-acetylmannosamine-6-phosphate 2-epimerase 
Protein accessionYP_002042593 
Protein GI194446080 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3010] Putative N-acetylmannosamine-6-phosphate epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTAC TTGAACAACT GGATAAAAAT ATTGCCGCTT CTGGCGGCCT GATTGTCTCC 
TGCCAGCCCG TTCCGGGCAG TCCGCTGGAT AAGCCGGAGA TTGTAGCGGC AATGGCGTTG
GCGGCGGAAC AGGCGGGCGC GGTTGCGGTG CGTATTGAAG GCATAGACAA CCTGCGTATG
ACCCGCTCGC TCGTTTCGGT ACCCATTATC GGCATTATCA AACGCGATCT GGATGAGTCT
CCAGTGCGCA TTACCCCTTT TCTCGACGAT GTAGATGCGC TGGCACAGGC CGGAGCAGCT
ATTATCGCCG TTGATGGAAC CGCTCGGCAA CGGCCGGTAG CCGTTGAGGC GTTGTTGGCG
CGCATTCATC ACCACCATCT ACTGGCGATG GCCGACTGCT CATCCGTGGA CGATGGTCTC
GCCTGTCAAC GGTTGGGCGC GGACATTATC GGCACGACAA TGTCCGGCTA CACCACCCCC
GATACGCCGG AGGAACCCGA TCTGCCCTTA GTCAAAGCGT TGCATGACGC CGGATGCCGG
GTAATAGCCG AAGGGCGCTA TAACTCGCCA GCACTGGCAG CGGAGGCGAT CCGCTATGGC
GCATGGGCGG TGACGGTGGG GTCCGCCATT ACCCGTCTGG AACATATCTG TGGATGGTAT
AACGACGCAT TAAAAAAGGC GGCGTCATGA
 
Protein sequence
MSLLEQLDKN IAASGGLIVS CQPVPGSPLD KPEIVAAMAL AAEQAGAVAV RIEGIDNLRM 
TRSLVSVPII GIIKRDLDES PVRITPFLDD VDALAQAGAA IIAVDGTARQ RPVAVEALLA
RIHHHHLLAM ADCSSVDDGL ACQRLGADII GTTMSGYTTP DTPEEPDLPL VKALHDAGCR
VIAEGRYNSP ALAAEAIRYG AWAVTVGSAI TRLEHICGWY NDALKKAAS