Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3580 |
Symbol | lptB |
ID | 6484438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3465696 |
End bp | 3466421 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642738860 |
Product | putative ABC transporter ATP-binding protein YhbG |
Protein accession | YP_002042577 |
Protein GI | 194444797 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACAT TAACTGCAAA GAATCTGGCG AAGGCCTATA AAGGCCGTCG CGTAGTGGAA GATGTCAGTC TGACCGTTAA CTCCGGGGAG ATTGTCGGGC TGCTCGGTCC AAACGGCGCG GGTAAAACCA CCACCTTTTA TATGGTCGTC GGTATCGTGC CGCGTGACGC AGGCAATATC ATCATCGATG ATGAAGATAT CAGTCTGCTG CCGCTGCACG CGCGCGCGCG CCGCGGTATC GGCTATTTGC CGCAGGAAGC CTCTATTTTC CGCCGTCTCA GCGTATTTGA TAACCTGATG GCGGTACTGC AAATTCGTGA CGATTTGACC GCAGAACAGC GAGAAGACCG CGCCAACGAG CTGATGGAAG AGTTTCATAT CGAGCATCTG CGCGACAGCA TGGGACAGGC GCTGTCCGGT GGTGAACGCC GTCGTGTAGA AATAGCCCGC GCGTTGGCCG CTAATCCCAA ATTTATCCTG CTGGATGAAC CCTTTGCCGG CGTTGACCCG ATTTCCGTTA TCGACATCAA ACGCATTATC GAGCATCTGC GCGATAGCGG GCTCGGCGTG CTGATCACCG ATCATAACGT CCGTGAGACG CTGGCAGTCT GTGAACGCGC CTATATCGTG AGCCAGGGCC ACCTTATTGC CCACGGTACG CCGACAGAAA TCCTGCAAGA CGAACACGTT AAGCGTGTAT ATCTTGGGGA AGACTTCAGA CTCTGA
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Protein sequence | MATLTAKNLA KAYKGRRVVE DVSLTVNSGE IVGLLGPNGA GKTTTFYMVV GIVPRDAGNI IIDDEDISLL PLHARARRGI GYLPQEASIF RRLSVFDNLM AVLQIRDDLT AEQREDRANE LMEEFHIEHL RDSMGQALSG GERRRVEIAR ALAANPKFIL LDEPFAGVDP ISVIDIKRII EHLRDSGLGV LITDHNVRET LAVCERAYIV SQGHLIAHGT PTEILQDEHV KRVYLGEDFR L
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