Gene SNSL254_A3580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3580 
SymbollptB 
ID6484438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3465696 
End bp3466421 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content55% 
IMG OID642738860 
Productputative ABC transporter ATP-binding protein YhbG 
Protein accessionYP_002042577 
Protein GI194444797 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAT TAACTGCAAA GAATCTGGCG AAGGCCTATA AAGGCCGTCG CGTAGTGGAA 
GATGTCAGTC TGACCGTTAA CTCCGGGGAG ATTGTCGGGC TGCTCGGTCC AAACGGCGCG
GGTAAAACCA CCACCTTTTA TATGGTCGTC GGTATCGTGC CGCGTGACGC AGGCAATATC
ATCATCGATG ATGAAGATAT CAGTCTGCTG CCGCTGCACG CGCGCGCGCG CCGCGGTATC
GGCTATTTGC CGCAGGAAGC CTCTATTTTC CGCCGTCTCA GCGTATTTGA TAACCTGATG
GCGGTACTGC AAATTCGTGA CGATTTGACC GCAGAACAGC GAGAAGACCG CGCCAACGAG
CTGATGGAAG AGTTTCATAT CGAGCATCTG CGCGACAGCA TGGGACAGGC GCTGTCCGGT
GGTGAACGCC GTCGTGTAGA AATAGCCCGC GCGTTGGCCG CTAATCCCAA ATTTATCCTG
CTGGATGAAC CCTTTGCCGG CGTTGACCCG ATTTCCGTTA TCGACATCAA ACGCATTATC
GAGCATCTGC GCGATAGCGG GCTCGGCGTG CTGATCACCG ATCATAACGT CCGTGAGACG
CTGGCAGTCT GTGAACGCGC CTATATCGTG AGCCAGGGCC ACCTTATTGC CCACGGTACG
CCGACAGAAA TCCTGCAAGA CGAACACGTT AAGCGTGTAT ATCTTGGGGA AGACTTCAGA
CTCTGA
 
Protein sequence
MATLTAKNLA KAYKGRRVVE DVSLTVNSGE IVGLLGPNGA GKTTTFYMVV GIVPRDAGNI 
IIDDEDISLL PLHARARRGI GYLPQEASIF RRLSVFDNLM AVLQIRDDLT AEQREDRANE
LMEEFHIEHL RDSMGQALSG GERRRVEIAR ALAANPKFIL LDEPFAGVDP ISVIDIKRII
EHLRDSGLGV LITDHNVRET LAVCERAYIV SQGHLIAHGT PTEILQDEHV KRVYLGEDFR
L