| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3542 |
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| Symbol | truB |
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| ID | 6483682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3434104 |
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| End bp | 3435048 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642738822 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002042541 |
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| Protein GI | 194444369 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 108 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGTC CTCGTCGTCG TGGCCGCGAC ATTCACGGCG TTCTGCTGCT GGATAAGCCG
CAGGGTATGT CCAGCAATGA CGTGCTGCAG AAAGTTAAGC GCATCTACAA TGCCAACCGC
GCCGGGCATA CCGGCGCGCT GGACCCGCTG GCGACCGGCA TGTTGCCGAT TTGCCTCGGC
GAAGCGACAA AATTTTCGCA GTACCTGCTG GATTCTGACA AACGCTATCG TGTTATTGCC
CGTCTGGGGC AGCGCACGGA TACCTCTGAC GCCGATGGTC AAATCGTGCA GGAGCGTCCG
GTGACTTTCA GCGCTGAGCA GCTTGCGAGC GCGCTGGAGA CCTTTCGTGG GGATATCGAA
CAGATTCCCT CAATGTATTC GGCGCTGAAG TATCAGGGCA AGAAGCTGTA CGAATATGCC
CGCCAGGGTA TCGAAGTGCC GCGCGAAGCC CGCCCGATTA CCGTCTATGA GCTGCTGTTT
ATTCGCCATG AAGGTAACGA GCTGGAGCTG GAAGTTCACT GCTCCAAAGG CACCTATATT
CGTACCATTA TTGATGATTT AGGTGAGAAA CTGGGCTGTG GCGCGCACGT AACCTACCTG
CGTCGTCTGA CGGTCAGCAA GTATCCGGTG GATCGTATGG TGACGCTGGA GCACTTGCGC
GAGCTGGTAG CACAGGCGGA ACAGCAGGGC GTTCCGGCGG CGCAGTTGCT CGATCCATTA
TTGATGCCAA TGGACAGTCC AGCTTCGGAC TATCCTGTTG TTAATCTGCC GTTAACATCT
TCGGTATACT TCAAAAATGG CAACCCGGTT CGTACCACGG GCGCGCCGTT GAAGGGACTG
GTTCGTGTGA CGGAAGGTGA AGACGATAAA TTTATCGGTA TGGGCGAAAT TGACGACGAA
GGCCGTGTCG CGCCTCGTCG GCTGGTAGTA GAGTACCCAG CGTAA
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| Protein sequence | MSRPRRRGRD IHGVLLLDKP QGMSSNDVLQ KVKRIYNANR AGHTGALDPL ATGMLPICLG
EATKFSQYLL DSDKRYRVIA RLGQRTDTSD ADGQIVQERP VTFSAEQLAS ALETFRGDIE
QIPSMYSALK YQGKKLYEYA RQGIEVPREA RPITVYELLF IRHEGNELEL EVHCSKGTYI
RTIIDDLGEK LGCGAHVTYL RRLTVSKYPV DRMVTLEHLR ELVAQAEQQG VPAAQLLDPL
LMPMDSPASD YPVVNLPLTS SVYFKNGNPV RTTGAPLKGL VRVTEGEDDK FIGMGEIDDE
GRVAPRRLVV EYPA
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