Gene SNSL254_A3535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3535 
Symbolmtr 
ID6482522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3426847 
End bp3428091 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content55% 
IMG OID642738818 
Producttryptophan permease 
Protein accessionYP_002042537 
Protein GI194445860 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00837] aromatic amino acid transport protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones115 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAC TTACCACCAC CCAAACGTCA CCTTCGCTGC TTGGCGGCGT GGTGATTATC 
GGCGGCACCA TCATTGGCGC GGGGATGTTC TCCCTGCCGG TGGTCATGTC CGGGGCGTGG
TTCTTCTGGT CGATGGCGGC GCTGGTCTTT ACCTGGTTTT GTATGCTGCA CTCCGGGCTG
ATGATTCTCG AAGCCAACCT TAACTACCGC ATTGGTTCGA GTTTCGACAC CATCACCAAA
GACCTGTTGG GCAAAGGCTG GAACGTGGTA AACGGCATCT CTATTGCCTT TGTGCTCTAT
ATCCTGACCT ACGCCTACAT TTCGGCGAGC GGCTCGATTC TGCACCATAC CTTTGCTGAG
ATGTCGCTGA ACGTGCCGGC ACGAGCAGCA GGCTTTGTCT TCGCGCTGCT GGTGGCGTTT
GTTGTCTGGT TGAGTACTAA AGCGGTGAGC CGCATGACGG CCATCGTACT GGGCGCGAAG
GTGATTACCT TCTTCCTGAC CTTCGGCAGC CTGTTGGGGC ACGTTCAGCC TGCCACGTTG
TTTAACGTGG CTGAAAGCCA CGCGTCATAT ACGCCGTACC TGCTGATGAC GCTGCCATTT
TGTCTGGCCT CTTTTGGTTA TCACGGTAAC GTACCGAGCT TGATGAAATA TTACGGCAAA
GATCCGCGTA CCATCGTCAA ATGCCTGATT TATGGGACGT TACTGGCGCT GGCGCTCTAT
TCCGTCTGGC TGCTGGGGAC GATGGGCAAC ATCCCGCGTC CGGAATTTAT CGGCATTGCG
CAGAAAGGCG GCAATATTGA TGTGCTGGTA CAGGCGTTGA GCGGCGTGCT GAACAGCCGC
AGCCTGGATC TGCTGCTGGT GGTGTTCTCT AACTTTGCGG TCGCCAGTTC CTTCCTTGGC
GTGACGCTGG GGCTGTTTGA CTATCTGGCG GATCTGTTTG GTTTTGATGA CTCGGCAATG
GGGCGTTTTA AAACGGCGCT GCTGACTTTC CTGCCGCCGA TGATTGGTGG CCTGCTGTAC
CCGAACGGTT TTCTGTACGC CATTGGCTAT GCAGGTTTAG CTGCAACTAT CTGGGCGGCC
ATTGTGCCTG CGCTGTTGGC GCGTAAATCT CGCGAACGTT TCGGCAGCCC AAAATTTCGC
GTCTGGGGCG GTAAACCGAT GATTGCCCTG ATTCTGATCT TCGGTGTCGG CAACGCGGTT
ATCCATATTC TGTCGAGCTT TAATTTGCTG CCGGTGTACC AGTAA
 
Protein sequence
MATLTTTQTS PSLLGGVVII GGTIIGAGMF SLPVVMSGAW FFWSMAALVF TWFCMLHSGL 
MILEANLNYR IGSSFDTITK DLLGKGWNVV NGISIAFVLY ILTYAYISAS GSILHHTFAE
MSLNVPARAA GFVFALLVAF VVWLSTKAVS RMTAIVLGAK VITFFLTFGS LLGHVQPATL
FNVAESHASY TPYLLMTLPF CLASFGYHGN VPSLMKYYGK DPRTIVKCLI YGTLLALALY
SVWLLGTMGN IPRPEFIGIA QKGGNIDVLV QALSGVLNSR SLDLLLVVFS NFAVASSFLG
VTLGLFDYLA DLFGFDDSAM GRFKTALLTF LPPMIGGLLY PNGFLYAIGY AGLAATIWAA
IVPALLARKS RERFGSPKFR VWGGKPMIAL ILIFGVGNAV IHILSSFNLL PVYQ