Gene SNSL254_A3493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3493 
Symbol 
ID6482437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp3387282 
End bp3387767 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content50% 
IMG OID642738780 
Producthypothetical protein 
Protein accessionYP_002042499 
Protein GI194446713 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCT CCAGCGATAA CAATGATGCG CCAAACCGCG TCATTGCTCA TGAAAATAGC 
AGCAGCCGCC GAATCGGCCC TCTGGAGAAT AAAATGAAAA AATTAGAAGA TGTTGGTGTA 
CTGATAGCGC GTATTTTAAT GCCAGTTCTG TTTATTACCG CAGGATGGGG AAAAATTAGC 
GGCTATGCGG GCACACAGCA GTATATGGAA GCGATGGGCG TACCAGGATT CCTGCTGCCG 
CTCACCATAC TGCTTGAGTT CGGCGGCGGT CTGGCGATTC TGCTGGGGTT CCTCACCCGC 
ACCACTGCGC TTTTCACCGC TGGTTTTACG TTGCTGACGG CATTGATCTT CCATAGCAAT 
TTTGCAGAAG GTGTAAACTC GCTGATGTTT ATGAAAAACC TGACCATTGC CGGCGGATTC 
TTATTACTGG CGTTAACCGG GCCTGGCGCG TTCAGCCTTG ACCGTCTGCT GAATAAAAAG 
TGGTAA
 
Protein sequence
MILSSDNNDA PNRVIAHENS SSRRIGPLEN KMKKLEDVGV LIARILMPVL FITAGWGKIS 
GYAGTQQYME AMGVPGFLLP LTILLEFGGG LAILLGFLTR TTALFTAGFT LLTALIFHSN 
FAEGVNSLMF MKNLTIAGGF LLLALTGPGA FSLDRLLNKK W