| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3425 |
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| Symbol | |
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| ID | 6485923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3320927 |
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| End bp | 3321910 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642738714 |
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| Product | trap dicarboxylate transporter subunit DctP |
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| Protein accession | YP_002042434 |
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| Protein GI | 194446478 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.715099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 91 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA CACGTTCATT CACAACATCA GCGGTATTAC TGGCCGGCTG TTTGCTACTG
GCATTTCCAG CGCTCGCCAA AACCACGCTG AAACTGAGCC ACAATCAGGA TAAAAGCCAC
GCCGTTCACA AAGCGATGAG CTATCTGGCC GATAAAGCGA AAGCCTATTC GGACGGCGAA
TTAAATATTC GTATTTACCC CAACGCCACG CTGGGCAACG AACGTGAATC GCTGGAATTG
ATGAACTCCG GCGCTCTGCA AATGGTGAAA GTCAATGCGG CATCGCTGGA GTCTTTTGCG
CCGGAATATA GCGTGTTTAG CCTGCCGTTT TTATTCCGTG ACCGCGATCA CTACTACAAC
GTACTGAAAA GCGACTTAGG GAAACGCATT CTCGCGTCCT CCGAAAGCAA AGGCTTCGTC
GGCTTAACCT GGTACGACGG CGGCGCCCGC AGTTTTTACG CTGGTAAGCC CATCACTCAA
CCCGACGATT TAGCCGGTAT GAAAATCAGA GTGCAGCAAA GCCCCAGCGC TATCGCGATG
GTGAAAGCGC TCGGCGGCGT GCCGACGCCG ATGGCGCAAG GCGAACTCTA TACCGCGCTC
CAGCAAGGCG TGGTCGATGG CGGCGAAAAC AACCCCGTGG TTTATGCCGA TATGCGTCAT
GCGGAGGTGG CGAAATTCTA TTCCCGCGAC GAGCACACGA TGGTGCCGGA TGTCCTGGTC
ATCAGTACCA AAGTACTTAA CAAATTGAGC GATAAAGAGC GGAAAGCGTT ATATAAAGCC
GCAGATGAAT CCATGCAGCA AATGAAAGAC GTCATCTGGC CCGCCGCGGA AAAAGAGGCT
TATGAGAGCA TGAAGGCCAT GAATGCGACC GTTGTTGATA TTGATAAATC CGCGTTCAAA
CAGCGTGTTA AGCCCTTGTT TGATGAGTTC CGCGCAAAAG ACGCTCAGTC AGCGAAGGAT
CTGGAATACA TCGAGAATAT GTAA
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| Protein sequence | MKNTRSFTTS AVLLAGCLLL AFPALAKTTL KLSHNQDKSH AVHKAMSYLA DKAKAYSDGE
LNIRIYPNAT LGNERESLEL MNSGALQMVK VNAASLESFA PEYSVFSLPF LFRDRDHYYN
VLKSDLGKRI LASSESKGFV GLTWYDGGAR SFYAGKPITQ PDDLAGMKIR VQQSPSAIAM
VKALGGVPTP MAQGELYTAL QQGVVDGGEN NPVVYADMRH AEVAKFYSRD EHTMVPDVLV
ISTKVLNKLS DKERKALYKA ADESMQQMKD VIWPAAEKEA YESMKAMNAT VVDIDKSAFK
QRVKPLFDEF RAKDAQSAKD LEYIENM
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