Gene SNSL254_A3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3407 
Symbol 
ID6483286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3305605 
End bp3306099 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content48% 
IMG OID642738698 
Producthypothetical protein 
Protein accessionYP_002042418 
Protein GI194443683 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.804576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCT TTCTTGAAAA TGTAATGTAT GCGTCTCGCT GGCTGCTCGC GCCGGTGTAT 
TTTGGCCTCT CTTTGGCGCT GATCGCTTTA GCGCTAAAAT TTTTCCAGGA AATTCTACAC
GTTCTGCCGA ACGTTTTTGC CCTGGCGGAG GCCGATCTGA TTCTGGTGCT GTTATCGCTG
GTTGATATGA CGCTGGTTGG CGGATTGCTG GTAATGGTCA TGTTCTCCGG GTATGAAAAC
TTTGTCTCTC AGCTGGATAT CTCTGCGGGC AAGGAGAAGC TGAACTGGCT GGGGAAAATG
GATGCGACGT CGCTAAAAAA TAAGGTGGCG GCATCGATAG TCGCTATCTC TTCCATTCAC
CTGTTACGCG TGTTTATGGA TGCGAAAAAC GTCCCGGATA ACAAATTAAT GTGGTATGTC
ATCATCCATC TGACCTTTGT CCTGTCGGCA TTTGTGATGG GCTATCTGGA CAGATTGACG
CGGCATAACC ATTGA
 
Protein sequence
MERFLENVMY ASRWLLAPVY FGLSLALIAL ALKFFQEILH VLPNVFALAE ADLILVLLSL 
VDMTLVGGLL VMVMFSGYEN FVSQLDISAG KEKLNWLGKM DATSLKNKVA ASIVAISSIH
LLRVFMDAKN VPDNKLMWYV IIHLTFVLSA FVMGYLDRLT RHNH