| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3350 |
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| Symbol | rdgB |
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| ID | 6486824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3251861 |
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| End bp | 3252454 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642738641 |
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| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
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| Protein accession | YP_002042362 |
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| Protein GI | 194442220 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.773276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.250048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAAAAG TTGTTCTCGC AACCGGCAAC GCCGGTAAAG TGCGCGAGCT CGCGTCGCTG
TTAAGCGATT TTGGGCTTGA TGTGGTAGCG CAAACGGAAC TGGGCGTTGA CTCCGCGGAA
GAAACCGGCC TGACGTTTAT TGAAAACGCG ATTCTCAAAG CGCGCCATGC CGCTAAAATG
ACCGGTCTGC CCGCCATTGC CGATGACTCC GGTCTGGCCG TTGACGTTTT AGGCGGCGCG
CCGGGTATCT ATTCCGCGCG CTATTCTGGC GAAAACGCGA CAGATCAGCA AAATCTGGAA
AAACTGCTGC ATACTCTACG AGATGTTCCG GACGACAAAC GCCAGGCGCG ATTCCATTGT
GTACTGGTTT ATTTGCGTCA TGCCGAAGAT CCCACACCGA TAGTCTGTCA CGGTAGCTGG
CCTGGCGTCA TTACTCGCCA GGCGGCCGGA AATGGCGGAT TTGGCTATGA TCCTATTTTC
TTCGTACCGT CTGAAGGCAA AACCGCCGCA GAACTGACCC GTGAAGAAAA AAGCGCGATT
TCCCACCGTG GACAAGCGCT CAAGCTGCTG CTGGATGCGT TACGCAATGG CTAA
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| Protein sequence | MQKVVLATGN AGKVRELASL LSDFGLDVVA QTELGVDSAE ETGLTFIENA ILKARHAAKM
TGLPAIADDS GLAVDVLGGA PGIYSARYSG ENATDQQNLE KLLHTLRDVP DDKRQARFHC
VLVYLRHAED PTPIVCHGSW PGVITRQAAG NGGFGYDPIF FVPSEGKTAA ELTREEKSAI
SHRGQALKLL LDALRNG
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