Gene SNSL254_A3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3340 
SymbolendA 
ID6486376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp3244736 
End bp3245443 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content56% 
IMG OID642738631 
Productendonuclease I 
Protein accessionYP_002042352 
Protein GI194446681 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00611255 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.202483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGTA ATTTTTCTTT TGCCGCTGCG TTGCTGGCCG CAGCGTTTTC AGGCCAGGCC 
CTGGCCGATG GCATTAACAA TTTTTCTCAG GCCAAAGCGG CGAGCGTCAA AGTCAATGCT 
GACGCGCCCG GCAGCTTTTA CTGCGGGTGC CAAATCCGCT GGCAGGGTAA AAAAGGCGTC 
GTAGACCTGG AGTCCTGCGG CTATAAGGTG CGTAAAAACG AGAATCGCGC CAGACGCATT 
GAGTGGGAGC ACGTTGTCCC CGCCTGGCAA TTCGGTCATC AGCGCCAGTG CTGGCAGGAC 
GGCGGGCGAA AAAACTGCGC TAAAGACCCG GTCTACCGCA AAATGGAAAG CGATATGCAT 
AACCTGCAAC CCGCGATTGG CGAAGTGAAT GGCGATCGCG GCAACTTTAT GTATAGCCAG 
TGGAACGGCG GCGAAGGTCA GTACGGGCAG TGCGCCATGA AAGTGGATTT CAAAGCGAAG 
CTCGCCGAGC CGCCCGCCCG CGCCCGTGGC GCAATCGCCC GCACTTATTT TTATATGCGC 
GACCAATACC AACTGAAACT TTCCCGCCAA CAAACGCAGC TTTTTAACGT CTGGGATAAG 
CAGTACCCCG TTACCGCCTG GGAGTGCGAG CGCGATGCGC GTATCGCGAA GGTCCAGGGT 
AATCATAATC CCTATGTGCA ACGCGCTTGC CAGGCGCGAA AGAGCTAA
 
Protein sequence
MYRNFSFAAA LLAAAFSGQA LADGINNFSQ AKAASVKVNA DAPGSFYCGC QIRWQGKKGV 
VDLESCGYKV RKNENRARRI EWEHVVPAWQ FGHQRQCWQD GGRKNCAKDP VYRKMESDMH 
NLQPAIGEVN GDRGNFMYSQ WNGGEGQYGQ CAMKVDFKAK LAEPPARARG AIARTYFYMR 
DQYQLKLSRQ QTQLFNVWDK QYPVTAWECE RDARIAKVQG NHNPYVQRAC QARKS