Gene SNSL254_A3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3236 
Symboltas 
ID6482729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3149888 
End bp3150928 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content55% 
IMG OID642738536 
Productputative aldo-keto reductase 
Protein accessionYP_002042258 
Protein GI194443055 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0896684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.000000643826 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACTATC ACCGTATACC CCACAGCTCG CTCGAAGTAA GTACGCTAGG GCTGGGCACA 
ATGACATTTG GTGAACAAAA CAGCGAAGCC GACGCTCACG CACAGCTCGA CTATGCCATC
GCAAATGGCA TTAACCTTAT CGATGCCGCC GAGATGTATC CGGTACCGCC GCGCCCGGAA
ACACAAGGGC TGACGGAGTC CTATATCGGT AACTGGCTCG CCAAACGCGG CAACCGTGAA
AAACTGATCA TCGCCAGCAA AGTTAGCGGA CCGGCACGTA ATAATGATCA AGGCATCCGG
CCTCATCAGG CGCTGGATCG TAAAAATATT CGCGAAGCGC TACACGACAG TTTGACCCGA
TTGCAGACCG ACTATCTGGA TTTGTATCAG GTGCACTGGC CGCAGCGCCC CACTAACTGC
TTCGGTAAAC TCGGCTATAA CTGGACGGAC TCCACGCCAG TAGTAAGTCT ACTGGAGACG
CTAGACGCGC TAAGTGAGTT TCAGCGAGCG GGTAAGATTC GTTATATTGG CGTTTCAAAT
GAGACAGCGT TTGGCGTTAT GCGCTATCTG CATCTGGCGG AAAAACATGA CCTGCCGCGT
ATTGTCACGA TCCAGAACCC CTATAGCCTG TTAAACCGCA GCTACGAGGT CGGGCTGGCG
GAAGTCAGCC AGTATGAAGG TGTTGAATTG CTCGCCTACT CCTGTCTGGC GTTTGGCACA
TTAACCGGTA AATACCTGAA CGGGGCCAAA CCCGCAGGCG CGCGGAATAC CTTGTTCAGC
CGCTTCACAC GTTACAGCGG CGAACAGGCG CAAAAAGCCG TTGCCGCCTA CGTCGATATC
GCGAAGCGTC ACAATCTTGA TCCGGCGCAG ATGGCGCTGG CCTTTGTTCG CCGCCAGCCG
TTTGTCGCCA GTACGTTACT GGGCGCAACC ACGATGGCGC AGCTCAAGAC GAATGTGGAA
AGTCTGCATC TGACGTTAAG CGAAGAGGTT CTGGCGGAGA TTGAGGCGGC GCATCAGGTT
TATACCTATC CGGCGCCGTG A
 
Protein sequence
MHYHRIPHSS LEVSTLGLGT MTFGEQNSEA DAHAQLDYAI ANGINLIDAA EMYPVPPRPE 
TQGLTESYIG NWLAKRGNRE KLIIASKVSG PARNNDQGIR PHQALDRKNI REALHDSLTR
LQTDYLDLYQ VHWPQRPTNC FGKLGYNWTD STPVVSLLET LDALSEFQRA GKIRYIGVSN
ETAFGVMRYL HLAEKHDLPR IVTIQNPYSL LNRSYEVGLA EVSQYEGVEL LAYSCLAFGT
LTGKYLNGAK PAGARNTLFS RFTRYSGEQA QKAVAAYVDI AKRHNLDPAQ MALAFVRRQP
FVASTLLGAT TMAQLKTNVE SLHLTLSEEV LAEIEAAHQV YTYPAP