| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3232 |
|---|
| Symbol | nudH |
|---|
| ID | 6484533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 3146506 |
|---|
| End bp | 3147036 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642738532 |
|---|
| Product | dinucleoside polyphosphate hydrolase |
|---|
| Protein accession | YP_002042254 |
|---|
| Protein GI | 194446442 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000155637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.0000853193 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGATTGATG ACGATGGCTA CCGCCCAAAT GTAGGTATCG TAATTTGTAA TCGTCAGGGG
CAGGTGATGT GGGCCCGGCG ATTTGGTCAG CACTCCTGGC AGTTCCCGCA GGGCGGGATA
AATCCAGGGG AGTCGGCAGA ACAGGCGATG TACCGGGAAC TGTTTGAAGA AGTTGGGTTA
AGCCGTAAAG ATGTGCGGAT CCTTGCTTCT ACTCGCAACT GGTTGCGTTA CAAGTTACCA
AAACGTTTGG TGCGTTGGGA CACAAAGCCG GTATGTATCG GCCAGAAACA AAAGTGGTTT
CTTTTGCAGT TAATGAGCGC CGACGCCGAA ATCAATATGC AAACCAGCAG TACGCCGGAG
TTTGACGGCT GGCGCTGGGT AAGTTACTGG TATCCGGTTC GACAAGTGGT GTCATTTAAA
CGCGATGTCT ACCGCAGGGT AATGAAAGAG TTTGCAAGTG TTGTCATGGC GCTTCAGGAT
AATCCCCCTA AGCTACAAAG CGCGCCTGCT TATCGACGTA AAAGAGGTTA A
|
|---|
| Protein sequence | MIDDDGYRPN VGIVICNRQG QVMWARRFGQ HSWQFPQGGI NPGESAEQAM YRELFEEVGL
SRKDVRILAS TRNWLRYKLP KRLVRWDTKP VCIGQKQKWF LLQLMSADAE INMQTSSTPE
FDGWRWVSYW YPVRQVVSFK RDVYRRVMKE FASVVMALQD NPPKLQSAPA YRRKRG
|
|---|
| |