Gene SNSL254_A3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3197 
SymbolfucA 
ID6485438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3110007 
End bp3110654 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content53% 
IMG OID642738500 
ProductL-fuculose phosphate aldolase 
Protein accessionYP_002042224 
Protein GI194445344 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR00760] L-ribulose-5-phosphate 4-epimerase
[TIGR01086] L-fuculose phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGGA ATAGACTGGC GCGGCAGATT ATTGATACCT GTCTGGAAAT GACGCGGTTA 
GGGTTAAATC AGGGGACGGC AGGTAACGTG AGCGTACGCT ATCAGGGCGG AATGCTGATT
ACGCCGACGG GGATCCCCTA CGAGAAGCTG ACAGAGTCGC ACATTGTCTT TATTGATGCA
GACGGTCAGC ATGAGCAGGG CAAGCTGCCT TCCAGCGAGT GGCGTTTTCA TATGGCGGCA
TACCAGACGC GCCCTGACGC CAATGCCGTG GTACATAACC ACGCTGTCCA TTGTACGGCA
GTCTCGATCC TCAATCGCCC GATTCCGGCG ATTCACTACA TGATTGCCGC CGCAGGAGGA
AACTCTATTC CCTGCGCGCC CTACGCCACT TTTGGCACCC GCGAACTTTC TGACCATGTT
GCCGTGGCGC TTAAAAATCG TAAAGCGACG CTGTTACAGC ATCACGGGCT TATCGCTTGT
GAAGAAAATT TAGACAAAGC GTTGTGGCTG GCGCATGAAG TGGAAGTGCT GGCGCAGCTC
TATTTAAGTA CGCTGGCCAT TGTCGATCCG GTACCGGTAC TGGATGACGA GGCGATCGCT
ATCGTACTGG AGAAATTTAA AACTTACGGA TTACGTATTG AAGAGTGA
 
Protein sequence
MERNRLARQI IDTCLEMTRL GLNQGTAGNV SVRYQGGMLI TPTGIPYEKL TESHIVFIDA 
DGQHEQGKLP SSEWRFHMAA YQTRPDANAV VHNHAVHCTA VSILNRPIPA IHYMIAAAGG
NSIPCAPYAT FGTRELSDHV AVALKNRKAT LLQHHGLIAC EENLDKALWL AHEVEVLAQL
YLSTLAIVDP VPVLDDEAIA IVLEKFKTYG LRIEE