Gene SNSL254_A3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3160 
Symbol 
ID6485334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3071797 
End bp3072159 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content53% 
IMG OID642738467 
Product6-pyruvoyl tetrahydrobiopterin synthase 
Protein accessionYP_002042191 
Protein GI194445925 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.291473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.466351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA CGTTGTATAA AGATTTCACC TTTGAAGCCG CTCACCGCCT GCCTCACGTG 
CCTGAAGGGC ATAAGTGCGG CCGCCTGCAC GGACACTCGT TTATGGTGCG TCTCGAAATT
ACCGGTGAAG TCGATCCGCA TACCGGTTGG ATTATGGATT TCGCGGATCT CAAAGCGGCG
TTTAAACCGA CTTACGATCG TCTTGATCAC TACTATCTGA ATGATATTCC AGGGCTGTCC
AATCCCACCA GCGAAGTGCT GGCAAAATGG ATTTGGGATC AGGTTAAGCC CGTCGTGCCG
CTACTGAGCG CCGTGATGGT GAAAGAGACC TGTACAGCCG GCTGCGTCTA TCGCGGCGAA
TAA
 
Protein sequence
MSTTLYKDFT FEAAHRLPHV PEGHKCGRLH GHSFMVRLEI TGEVDPHTGW IMDFADLKAA 
FKPTYDRLDH YYLNDIPGLS NPTSEVLAKW IWDQVKPVVP LLSAVMVKET CTAGCVYRGE