Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3159 |
Symbol | cysJ |
ID | 6484276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3069574 |
End bp | 3071373 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642738465 |
Product | sulfite reductase subunit alpha |
Protein accession | YP_002042189 |
Protein GI | 194444907 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
TIGRFAM ID | [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.87087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 0.534662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAC CGGCTCCACT GACTGGGTTG CTTCCGCTTA ATCCGGAGCA ACTGGCGCGC CTTCAGGCCG CGACAACCGA CCTTACTCCC GAACAGCTTG CCTGGGTCTC CGGCTATTTT TGGGGCGTAC TGAACCCGCG CTCAGGCGCT GTTGCCGTCA CGCCTGTTCC TGAGCGGAAG ATGCCGGGGG TTACGCTTAT CTCCGCTTCG CAAACCGGCA ATGCGCGTCG TGTGGCGGAA GCGCTGCGTG ATGATCTGCT GGCGGCCAAC CTTAATGTGA CACTGGTGAA CGCCGGCGAC TACAAATTCA AACAGATTGC CAGTGAAAAA CTGCTGGTGA TAGTGACGTC CACCCAGGGA GAAGGCGAGC CGCCGGAAGA GGCCGTCGCG CTGCATAAGT TCCTGTTCTC GAAAAAAGCG CCGAAACTGG AAAACACCGC TTTTGCCGTG TTTAGCCTCG GCGACACCTC TTATGAATTT TTCTGCCAGT CCGGAAAAGA TTTCGACAGC AAACTGGCGG AACTGGGCGG TGAACGCCTG CTCGACCGTG TCGATGCTGA CGTTGAATAT CAGGCAGCTG CCAGCGAATG GCGCGCCCGC GTGGTTGATG TTCTGAAGTC CCGCGCACCT GTCGCGGCAC CTTCGCAATC CGTCGCTACT GGCGCGGTAA ACGACATCCA CACCAGCCCC TATACCAAAG ACGCGCCGCT GGCCGCGACC CTCTCCGTGA ATCAGAAAAT CACCGGTCGC AACTCGGAAA AAGATGTGCG TCATATTGAG ATTGATTTAG GCGACTCCGG CCTGCGCTAT CAGCCGGGCG ATGCGCTGGG CGTCTGGTAT CAGAACGATC CGGCTCTGGT GAAGGAGCTG GTTGAGTTGC TGTGGCTGAA AGGCGATGAG CCGGTGACGG TTGATGGTAA AACCCTGCCG CTCGCCGAAG CGCTGGAGTG GCACTTCGAG CTGACGGTGA ATACCGCCAA CATTGTTGAG AACTACGCGA CCCTGACGCG CAGTGAGTCG CTGTTGCCAT TAGTGGGCGA CAAAGCGCAG CTCCAGCACT ACGCCGCGAC CACGCCCATT GTTGATATGG TGCGTTTCTC TCCGGCGCAG CTGGATGCTC AGGCGCTAAT CGACCTGCTG CGACCGCTGA CGCCGCGCCT CTACTCTATC GCCTCTTCGC AGGCGGAAAC TGAAAACGAA GTCCACGTCA CCGTTGGCGT GGTTCGTTAT GACATTGAAG GCCGCGCCCG CGCCGGTGGC GCCTCCAGCT TCCTCGCCGA CCGCGTGGAA GAAGAGGGCG AAGTTCGCGT CTTTATTGAG CATAACGATA ACTTCCGCCT GCCAGCTAAC CCGCAGACGC CGGTGATCAT GATTGGCCCC GGCACCGGCA TCGCGCCGTT CCGCGCCTTT ATGCAACAGC GTGCGGCGGA AGGGGCGGAA GGCAAGAACT GGCTGTTCTT CGGCAACCCG CACTTTACCG AAGATTTCCT CTATCAGGTG GAGTGGCAGC GCTACGTGAA AGAAGGCGTG CTGAACCGGA TCGATCTGGC CTGGTCCCGC GATCAAAAAG AAAAAATCTA CGTACAAGAT AAACTGCGCG AACAGGGCGC GGAGCTGTGG CGCTGGATCA ATGACGGTGC CCACATTTAT GTCTGCGGCG ACGCCAGGCG TATGGCCGCA GATGTCGAAA AAGCATTGCT GGAAGTGATC GCTGAATTCG GCGGTATGGA CCTCGAATCG GCAGATGAAT ATTTAAGTGA GCTGCGCGTA GAGCGCCGTT ATCAGCGAGA TGTCTACTAA
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Protein sequence | MTTPAPLTGL LPLNPEQLAR LQAATTDLTP EQLAWVSGYF WGVLNPRSGA VAVTPVPERK MPGVTLISAS QTGNARRVAE ALRDDLLAAN LNVTLVNAGD YKFKQIASEK LLVIVTSTQG EGEPPEEAVA LHKFLFSKKA PKLENTAFAV FSLGDTSYEF FCQSGKDFDS KLAELGGERL LDRVDADVEY QAAASEWRAR VVDVLKSRAP VAAPSQSVAT GAVNDIHTSP YTKDAPLAAT LSVNQKITGR NSEKDVRHIE IDLGDSGLRY QPGDALGVWY QNDPALVKEL VELLWLKGDE PVTVDGKTLP LAEALEWHFE LTVNTANIVE NYATLTRSES LLPLVGDKAQ LQHYAATTPI VDMVRFSPAQ LDAQALIDLL RPLTPRLYSI ASSQAETENE VHVTVGVVRY DIEGRARAGG ASSFLADRVE EEGEVRVFIE HNDNFRLPAN PQTPVIMIGP GTGIAPFRAF MQQRAAEGAE GKNWLFFGNP HFTEDFLYQV EWQRYVKEGV LNRIDLAWSR DQKEKIYVQD KLREQGAELW RWINDGAHIY VCGDARRMAA DVEKALLEVI AEFGGMDLES ADEYLSELRV ERRYQRDVY
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