Gene SNSL254_A3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3159 
SymbolcysJ 
ID6484276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3069574 
End bp3071373 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content58% 
IMG OID642738465 
Productsulfite reductase subunit alpha 
Protein accessionYP_002042189 
Protein GI194444907 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0369] Sulfite reductase, alpha subunit (flavoprotein) 
TIGRFAM ID[TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.87087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.534662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC CGGCTCCACT GACTGGGTTG CTTCCGCTTA ATCCGGAGCA ACTGGCGCGC 
CTTCAGGCCG CGACAACCGA CCTTACTCCC GAACAGCTTG CCTGGGTCTC CGGCTATTTT
TGGGGCGTAC TGAACCCGCG CTCAGGCGCT GTTGCCGTCA CGCCTGTTCC TGAGCGGAAG
ATGCCGGGGG TTACGCTTAT CTCCGCTTCG CAAACCGGCA ATGCGCGTCG TGTGGCGGAA
GCGCTGCGTG ATGATCTGCT GGCGGCCAAC CTTAATGTGA CACTGGTGAA CGCCGGCGAC
TACAAATTCA AACAGATTGC CAGTGAAAAA CTGCTGGTGA TAGTGACGTC CACCCAGGGA
GAAGGCGAGC CGCCGGAAGA GGCCGTCGCG CTGCATAAGT TCCTGTTCTC GAAAAAAGCG
CCGAAACTGG AAAACACCGC TTTTGCCGTG TTTAGCCTCG GCGACACCTC TTATGAATTT
TTCTGCCAGT CCGGAAAAGA TTTCGACAGC AAACTGGCGG AACTGGGCGG TGAACGCCTG
CTCGACCGTG TCGATGCTGA CGTTGAATAT CAGGCAGCTG CCAGCGAATG GCGCGCCCGC
GTGGTTGATG TTCTGAAGTC CCGCGCACCT GTCGCGGCAC CTTCGCAATC CGTCGCTACT
GGCGCGGTAA ACGACATCCA CACCAGCCCC TATACCAAAG ACGCGCCGCT GGCCGCGACC
CTCTCCGTGA ATCAGAAAAT CACCGGTCGC AACTCGGAAA AAGATGTGCG TCATATTGAG
ATTGATTTAG GCGACTCCGG CCTGCGCTAT CAGCCGGGCG ATGCGCTGGG CGTCTGGTAT
CAGAACGATC CGGCTCTGGT GAAGGAGCTG GTTGAGTTGC TGTGGCTGAA AGGCGATGAG
CCGGTGACGG TTGATGGTAA AACCCTGCCG CTCGCCGAAG CGCTGGAGTG GCACTTCGAG
CTGACGGTGA ATACCGCCAA CATTGTTGAG AACTACGCGA CCCTGACGCG CAGTGAGTCG
CTGTTGCCAT TAGTGGGCGA CAAAGCGCAG CTCCAGCACT ACGCCGCGAC CACGCCCATT
GTTGATATGG TGCGTTTCTC TCCGGCGCAG CTGGATGCTC AGGCGCTAAT CGACCTGCTG
CGACCGCTGA CGCCGCGCCT CTACTCTATC GCCTCTTCGC AGGCGGAAAC TGAAAACGAA
GTCCACGTCA CCGTTGGCGT GGTTCGTTAT GACATTGAAG GCCGCGCCCG CGCCGGTGGC
GCCTCCAGCT TCCTCGCCGA CCGCGTGGAA GAAGAGGGCG AAGTTCGCGT CTTTATTGAG
CATAACGATA ACTTCCGCCT GCCAGCTAAC CCGCAGACGC CGGTGATCAT GATTGGCCCC
GGCACCGGCA TCGCGCCGTT CCGCGCCTTT ATGCAACAGC GTGCGGCGGA AGGGGCGGAA
GGCAAGAACT GGCTGTTCTT CGGCAACCCG CACTTTACCG AAGATTTCCT CTATCAGGTG
GAGTGGCAGC GCTACGTGAA AGAAGGCGTG CTGAACCGGA TCGATCTGGC CTGGTCCCGC
GATCAAAAAG AAAAAATCTA CGTACAAGAT AAACTGCGCG AACAGGGCGC GGAGCTGTGG
CGCTGGATCA ATGACGGTGC CCACATTTAT GTCTGCGGCG ACGCCAGGCG TATGGCCGCA
GATGTCGAAA AAGCATTGCT GGAAGTGATC GCTGAATTCG GCGGTATGGA CCTCGAATCG
GCAGATGAAT ATTTAAGTGA GCTGCGCGTA GAGCGCCGTT ATCAGCGAGA TGTCTACTAA
 
Protein sequence
MTTPAPLTGL LPLNPEQLAR LQAATTDLTP EQLAWVSGYF WGVLNPRSGA VAVTPVPERK 
MPGVTLISAS QTGNARRVAE ALRDDLLAAN LNVTLVNAGD YKFKQIASEK LLVIVTSTQG
EGEPPEEAVA LHKFLFSKKA PKLENTAFAV FSLGDTSYEF FCQSGKDFDS KLAELGGERL
LDRVDADVEY QAAASEWRAR VVDVLKSRAP VAAPSQSVAT GAVNDIHTSP YTKDAPLAAT
LSVNQKITGR NSEKDVRHIE IDLGDSGLRY QPGDALGVWY QNDPALVKEL VELLWLKGDE
PVTVDGKTLP LAEALEWHFE LTVNTANIVE NYATLTRSES LLPLVGDKAQ LQHYAATTPI
VDMVRFSPAQ LDAQALIDLL RPLTPRLYSI ASSQAETENE VHVTVGVVRY DIEGRARAGG
ASSFLADRVE EEGEVRVFIE HNDNFRLPAN PQTPVIMIGP GTGIAPFRAF MQQRAAEGAE
GKNWLFFGNP HFTEDFLYQV EWQRYVKEGV LNRIDLAWSR DQKEKIYVQD KLREQGAELW
RWINDGAHIY VCGDARRMAA DVEKALLEVI AEFGGMDLES ADEYLSELRV ERRYQRDVY