| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3153 |
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| Symbol | cse1 |
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| ID | 6486845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3060910 |
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| End bp | 3062445 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642738461 |
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| Product | CRISPR-associated protein Cse1 family |
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| Protein accession | YP_002042185 |
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| Protein GI | 194445089 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.670831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAA CCAAAGAGAA ATGGCTTCCC GTCATATTCT CAAACGGCGA TAAAAAGAAA
ATATCATTAC GCGATCTTCT GGATAACCGC ATTCAGGATC TTGCCTATCC TCGGGCTGAT
TTTCAGGGGG CGGCATGGCA AATGCTGATT GGTATTTTAC AATGTACCGT CGCGCCGGAA
GATAAAGAAG AATGGGCAGA TATCTGGCAT GAAAGTATCG AATTCGAACA ATGGGAGAAG
GCGTTAAATA CGATTTCTCT GGCTCTACAG TTCGGCGAGC AAAAACCTTC CTTCCTGCAA
AGTTTTGATC CTCTCGATAG TGAATATGGT TCTATTGCCG GGCTGCTGGT GGATGCGCCG
GGCGGGAATG CGCTCAAGCT CAATAAAGAT CATTTTGTAA AACGTGGCAA CGTAGAACAA
ATATGTCCTC ACTGCGCGGC GATAGCGCTA TTTGCGATTC AAACCAATTC ACCTGCCGGC
GGGGCGGGTT ACCGGGTAGG GATGCGCGGC GGTGGTCCGC TGACTACGCT GGTGGTACCG
CAGGAAGAAG ATAAATATCC ACTATGGAAA AAACTTTGGC TTAACGTTTT GCCGCAGGAA
GAGCCGCCGA ATGTTACACA GCATCCACTC ATTTTTCCCT GGCTTGCGCC GACGAAAACC
AGCGAAAAAG CGGGGAATGT GGTCACACCG GATAATGCGC ACCCCTTGCA AGCCTACTGG
GGGATGCCGC GGCGCATAGA ACTGGATTTC ACCCACACTG TGGCAGGTAT CTGCGATTTG
TGCGGGGAGC ATCACGAATC ACTGCTACTG CAAATGTGTA GTAAAAATTA TGGCGTTCAG
TACGACAGTT GGCTACATCC CTTCTCCCCA TATCGGCAGG CATTGAAAGA TCCATCCGCA
CCCTGGCTGG CGTTTAAAGG GCAGCCGGGC GGGTCAAGTT ATAAAGACTG GTTGGGGCTG
ATGCTCAATC GTGAGGATAA GTTCAACAAA ATGCAGCCTG CAAAGGTCGT TCGTGCCGCT
GGTCAGCGGA ACAAAATGAG CCTGTGGTGC TTTGCCTGGG ATATGGATAA GGCCAAGGTC
CGCTGCTGGT ATCAGCACCG TATTCCGCTC ATTAGCGTTT TGCACGAAGA GCAATTTCTC
GCTGCACTTA ACACCGTGCT GGTGCTGGCT AGTGAGTCGC TGTCGCTGTT ACGGAACGCG
TTAAAGAGCG CCAAATTCGA TTGTCCGAAA GAAGCCAAAA TGGATTTTAG TATGGTGGAT
ATCGCCTTCT GGCAGGAAAC CGAACCCGCT TTTCGGACGT TGCAAGAGGC GCTGGCTGTC
GATCCGCTTC GGCAGGATAC GCAGACTCGC CACGCAGTAA GTCAGTGGGA GGCGGAATTA
GCACACTATC TATTTCACGT TTTTGACCGT GATGCCCTGA CCAACCCCGA CTGCCCGGAC
GATATCCTGC AGCGCCAGCT GACGGCCCGA CAGGATTTAG CCAGCAGCTA TCGTAAACAT
AAAGCGCGCA AGGATGTGTT GGCGCTGGTC GAATAA
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| Protein sequence | MDLTKEKWLP VIFSNGDKKK ISLRDLLDNR IQDLAYPRAD FQGAAWQMLI GILQCTVAPE
DKEEWADIWH ESIEFEQWEK ALNTISLALQ FGEQKPSFLQ SFDPLDSEYG SIAGLLVDAP
GGNALKLNKD HFVKRGNVEQ ICPHCAAIAL FAIQTNSPAG GAGYRVGMRG GGPLTTLVVP
QEEDKYPLWK KLWLNVLPQE EPPNVTQHPL IFPWLAPTKT SEKAGNVVTP DNAHPLQAYW
GMPRRIELDF THTVAGICDL CGEHHESLLL QMCSKNYGVQ YDSWLHPFSP YRQALKDPSA
PWLAFKGQPG GSSYKDWLGL MLNREDKFNK MQPAKVVRAA GQRNKMSLWC FAWDMDKAKV
RCWYQHRIPL ISVLHEEQFL AALNTVLVLA SESLSLLRNA LKSAKFDCPK EAKMDFSMVD
IAFWQETEPA FRTLQEALAV DPLRQDTQTR HAVSQWEAEL AHYLFHVFDR DALTNPDCPD
DILQRQLTAR QDLASSYRKH KARKDVLALV E
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