| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3149 |
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| Symbol | cse |
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| ID | 6484086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3057771 |
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| End bp | 3058475 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642738457 |
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| Product | crispr-associated protein Cse3 family |
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| Protein accession | YP_002042181 |
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| Protein GI | 194442456 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.62558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATCTTT CTCGTATTCA ACTCCGGTTT AATAATTTGC GACCGGAGAT GTTGGCAAAG
TGGAATTCAG CCAGGCCTTA TGCCAGCCAC CAGTGGTTAT GGCAGCTCTT TCCGGAACAG
GAATTGCGTC AGTTTCTGTT TCGCGAAGAG GCGCATGGCG GCTTTTTTAT GCTCTCGGCA
ATACCGCCGT TATTGCAGCA CACCCTGTTT CTTATTGAAA CCAAACCATT TAATCCGCAA
CTGACAAATG GTCTTGAGCT TGATTTTCAA CTACGAGCTA ACCCGGTGAT AACCCGTAAC
GGTAAGCGCA GTGACGTGAT GATGAACGCG AAACATCAGG CGAAGGCGAA TGGTGTGGAG
AAAGAGCGGT GGTGGGAGCT TCAACAGCAG GCCGCGCAGG CGTGGCTGGA ACAACAAGGG
CAGCAGCATG GTTTCCGGTT GATTGCACCG GAACCTGATG ATTTCGCTAT GTGGGCTGGT
GACGAGTACA GTGAATTGCA GGCGCATTGT GGATGCGTGC AAGCGTATCA GCAGCATCGT
TTTGTCCGTA AAGACCAGGA AACCCCAATC ACTTTCAGTA GCGTTGATTT TAGCGGTGCG
CTCTGTATCA CCGATGCAGC ACTGTTTAAA CAGGCTTTAT TTTCCGGATT AGGTAAAAGT
AAAGCGCTGG GCTGCGGAAT GCTGATGGTA AAAAGGAAAC GCTGA
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| Protein sequence | MYLSRIQLRF NNLRPEMLAK WNSARPYASH QWLWQLFPEQ ELRQFLFREE AHGGFFMLSA
IPPLLQHTLF LIETKPFNPQ LTNGLELDFQ LRANPVITRN GKRSDVMMNA KHQAKANGVE
KERWWELQQQ AAQAWLEQQG QQHGFRLIAP EPDDFAMWAG DEYSELQAHC GCVQAYQQHR
FVRKDQETPI TFSSVDFSGA LCITDAALFK QALFSGLGKS KALGCGMLMV KRKR
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