| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3148 |
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| Symbol | cas1 |
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| ID | 6485656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3056854 |
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| End bp | 3057771 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642738456 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_002042180 |
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| Protein GI | 194444085 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGGC TGCCGCTGAA TCCCATCCCG TTGAAAGACC GTGTTTCGAT GATATTTCTC
CAGTACGGAC AAATAGATGT GATCGACGGT GCGTTTGTGC TTATCGATAA AACGGGTGTA
CGTACCCATA TTCCTGTTGG ATCGGTGGCC TGCATCATGC TGGAACCGGG GACGCGGGTT
TCCCATGCCG CCGTGCGACT TGCGGCAACG GTGGGTACGT TACTGGTGTG GGTGGGGGAA
GCGGGCGTAC GCGTTTACGC TTCGGGGCAG CCTGGTGGTG CCCGTTCCGA CAAATTGCTT
TATCAGGCGA AACTTGCACT GGATGAAGAT TTGCGGCTGA AGGTCGTGCG TAAAATGTTT
GAATTACGTT TTGGCGAACC CGCGCCGAGC CGTCGTTCTG TAGATCAATT GCGTGGTATT
GAGGGGAGCC GTGTGTGGGC AACCTATGCA CTACTTGCTA AGCAGTATGG CGTGAAATGG
CAGGGACGTC GCTACGATCC GAAAGACTGG GAGAAAGGCG ATGTCATTAA TCAGTGTATC
AGCTCGGCAA CCTCCTGCCT CTATGGCGTA ACGGAGGCGG CAATACTGGC TGCCGGATAT
GCGCCCGCGA TTGGATTTGT GCACACCGGC AAGCCGCTTT CTTTTGTCTA TGATATTGCC
GATATCATTA AATTTGAGAC CGTTGTACCG AAAGCATTTG AAATTGCGCG ACGTAATCCT
GCCGAGCCTG ATCGTGATGT CCGTATTGCC TGCCGGGATA TCTTCCGCAG TGGAAAAACA
TTGGCGAAAT TGATTCCTCT TATTGAAGAT GTTCTCGCGG CAGGGGAAAT TCAACCGCCG
TTACCTCCTG AAGATTCACA ACCCATAGCG ATCCCTCTTC CTGTTGCGTT GGGAGATTCC
GGTCATCGGA GTACCTAA
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| Protein sequence | MSWLPLNPIP LKDRVSMIFL QYGQIDVIDG AFVLIDKTGV RTHIPVGSVA CIMLEPGTRV
SHAAVRLAAT VGTLLVWVGE AGVRVYASGQ PGGARSDKLL YQAKLALDED LRLKVVRKMF
ELRFGEPAPS RRSVDQLRGI EGSRVWATYA LLAKQYGVKW QGRRYDPKDW EKGDVINQCI
SSATSCLYGV TEAAILAAGY APAIGFVHTG KPLSFVYDIA DIIKFETVVP KAFEIARRNP
AEPDRDVRIA CRDIFRSGKT LAKLIPLIED VLAAGEIQPP LPPEDSQPIA IPLPVALGDS
GHRST
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