| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3132 |
|---|
| Symbol | pcm |
|---|
| ID | 6482284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 3046106 |
|---|
| End bp | 3046732 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642738443 |
|---|
| Product | protein-L-isoaspartate O-methyltransferase |
|---|
| Protein accession | YP_002042167 |
|---|
| Protein GI | 194445194 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 0.146098 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAGTG GACGTGTACA GGCTCTTCTT GAACAATTGC GCGCGCAGGG CATCAGAGAT
GAGCAGGTGC TTAATGCGCT TGCTGCAGTG CCGCGCGAGA AATTTATTGA TGAAGCGTTT
GAACATAAGG CCTGGGAAAA TATCGCTTTG CCGATAGGCC AGGGTCAGAC GATTTCGCAG
CCCTATATGG TGGCGCGAAT GACGGAACTG CTCGAACTGA CGCCGCAATC CAGGGTGCTG
GAAATTGGCA CCGGTTCCGG CTATCAGACG GCGATTCTGG CGCATCTGGT ACATCACGTT
TGCTCCGTTG AGCGGATTAA GGGGCTGCAA TGGCAGGCGC GTCGCCGCCT GAAGCAGCTC
GATTTACATA ATGTTTCTAC CCGTCATGGC GATGGCTGGC AAGGCTGGCA GGCGCGTGCG
CCGTTTGACG CTATCATTGT GACGGCCGCG CCGCCGGAAA TTCCTACCGC GCTCATGGCA
CAGTTGGATG AAGGCGGCAT TCTTGTTCTG CCCGTGGGCG ATGAGCAGCA GTTTTTGAAA
CGCGTGCGTC GCCGGGGCGG CGAATTTATT ATCGATACCG TGGAGGCCGT TCGCTTCGTC
CCGTTAGTCA AGGGAGAGCT GGCCTAG
|
|---|
| Protein sequence | MVSGRVQALL EQLRAQGIRD EQVLNALAAV PREKFIDEAF EHKAWENIAL PIGQGQTISQ
PYMVARMTEL LELTPQSRVL EIGTGSGYQT AILAHLVHHV CSVERIKGLQ WQARRRLKQL
DLHNVSTRHG DGWQGWQARA PFDAIIVTAA PPEIPTALMA QLDEGGILVL PVGDEQQFLK
RVRRRGGEFI IDTVEAVRFV PLVKGELA
|
|---|
| |