| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3114 |
|---|
| Symbol | mutS |
|---|
| ID | 6485637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 3028527 |
|---|
| End bp | 3031094 |
|---|
| Gene Length | 2568 bp |
|---|
| Protein Length | 855 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642738426 |
|---|
| Product | DNA mismatch repair protein MutS |
|---|
| Protein accession | YP_002042150 |
|---|
| Protein GI | 194445735 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.0090493 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAGT CATTTGATAA GGACTTCTCC AACCACACCC CGATGATGCA GCAGTATCTC
AAGCTGAAAG CCCAGCATCC GGAGATCCTG CTCTTTTATC GTATGGGAGA CTTTTACGAG
CTGTTTTATG ACGACGCAAA GCGTGCGTCG CAGTTGCTCG ATATTTCGCT GACCAAACGC
GGCGCATCGG CTGGCGAACC TATCCCTATG GCGGGTATCC CGCACCACGC CGTAGAAAAC
TACCTCGCGA AACTGGTCAA TCAGGGCGAA TCCGTCGCTA TTTGCGAACA GATTGGCGAT
CCGGCCACCA GCAAAGGTCC CGTTGAACGT AAGGTCGTGC GTATCGTTAC GCCTGGCACC
ATCAGCGATG AAGCCCTGTT ACAGGAGCGT CAGGATAACC TGCTGGCGGC TATCTGGCAG
GATGGTAAAG GCTACGGTTA CGCCACGCTG GATATCAGCT CCGGGCGCTT TCGTCTGAGC
GAACCCGCCG ACCGTGAAAC GATGGCCGCA GAGCTGCAGC GCACCAATCC CGCCGAACTG
TTGTATGCCG AAGATTTTGC TGAAATGGCG TTAATAGAGG GACGCCGGGG TCTGCGCCGT
CGCCCGTTGT GGGAGTTTGA GATTGATACC GCCCGCCAGC AGTTAAATCT GCAATTCGGT
ACGCGGGATC TGGTCGGTTT CGGCGTCGAA AATGCCTCGC GTGGATTATG TGCGGCAGGC
TGCCTGTTAC AGTACGTAAA AGATACCCAG CGCACCTCCC TGCCGCATAT TCGTTCCATT
ACGATGGAAC GCCAGCAGGA CAGCATCATT ATGGATGCCG CGACCCGCCG CAATCTGGAA
ATTACCCAGA ACCTGGCCGG CGGTGTCGAA AATACCCTCG CCGCGGTGCT TGACTGTACC
GTGACGCCAA TGGGTAGCCG AATGCTTAAA CGCTGGCTGC ATATGCCGGT ACGAAATACC
AACATATTGC GTGAACGCCA GCAGACCATC GGCGCCTTGC AGGACACCGT CAGCGAACTG
CAACCGGTGC TGCGTCAGGT CGGCGATCTG GAGCGTATCC TTGCGCGTCT GGCGCTGCGC
ACCGCGCGTC CGCGCGATCT CGCCCGAATG CGTCACGCCT TCCAGCAACT GCCGGAATTG
CACGCTCAGC TTGAAACCGT TGACAGCGCG CCGGTACAGG CGTTGCGTAA AAAAATGGGC
GATTTCGCCG AGCTGCGCGA CCTCCTGGAA CGCGCCATTA TTGACGCGCC GCCGGTACTG
GTCCGCGACG GCGGCGTTAT TGCGCCCGGC TACCATGAAG AGCTGGACGA ATGGCGCGCG
CTGGCGGACG GCGCCACCGA TTATCTCGAT CGTCTGGAAA TTCGCGAGCG CGAGCGTACC
GGGCTGGATA CGCTAAAAGT CGGCTATAAC GCGGTACATG GTTATTACAT TCAGATTAGC
CGTGGTCAAA GCCATCTGGC GCCCATCAAT TATGTGCGTC GCCAGACGCT GAAAAATGCC
GAACGCTACA TTATTCCTGA GCTTAAAGAG TACGAAGATA AAGTTCTGAC CTCGAAAGGC
AAAGCGCTGG CGCTGGAAAA ACAGCTATAT GACGAATTGT TTGATCTGCT GTTGCCGCAT
CTGGCCGATT TACAGCAGAG CGCCAACGCG CTGGCGGAGC TGGATGTGCT GGTTAACCTG
GCCGAACGCG CCTGGACGCT GAATTACACC TGCCCGACAT TTACCGATAA ACCCGGTATC
CGTATTACCG AAGGTCGCCA CCCGGTGGTT GAACAGGTAC TGAATGAGCC GTTTATCGCT
AACCCGCTCA ATCTGTCGCC GCAGCGCCGA ATGTTGATCA TTACCGGCCC CAATATGGGC
GGTAAAAGTA CCTATATGCG ACAAACGGCA TTGATCGCCC TGCTGGCCTA TATCGGCAGT
TACGTTCCGG CGCAAAACGT GGAAATCGGC CCCATCGACC GTATTTTTAC CCGCGTCGGC
GCAGCGGACG ACCTGGCCTC CGGGCGTTCG ACCTTTATGG TGGAGATGAC CGAAACCGCG
AACATTCTGC ATAATGCCAC GGAAAACAGT CTGGTATTGA TGGATGAAAT CGGGCGCGGT
ACCTCCACGT ATGACGGGCT GTCGTTGGCC TGGGCCTGCG CGGAGAATCT CGCGAATAAG
ATTAAAGCGT TAACGCTGTT CGCTACCCAC TACTTCGAGC TGACCCAATT ACCGGAGAAA
ATGGAAGGCG TGGCGAACGT CCACCTGGAT GCGCTGGAAC ACGGCGATAC TATCGCGTTT
ATGCACAGCG TGCAGGACGG CGCGGCAAGT AAGAGCTATG GCCTGGCGGT CGCGGCGCTT
GCGGGCGTCC CTAAAGAAGT CATCAAACGC GCGCGCCAGA AACTCCGCGA GCTGGAAAGC
ATCTCGCCCA ATGCGGCGGC AACGCAGGTG GACGGCACGC AAATGTCGTT GCTTGCGGCC
CCGGAGGAGA CATCGCCTGC CGTTGAAGCG CTGGAAAATC TCGATCCGGA CTCTCTGACG
CCACGCCAGG CGCTGGAGTG GATCTATCGG CTGAAAAGTC TGGTGTAA
|
|---|
| Protein sequence | MNESFDKDFS NHTPMMQQYL KLKAQHPEIL LFYRMGDFYE LFYDDAKRAS QLLDISLTKR
GASAGEPIPM AGIPHHAVEN YLAKLVNQGE SVAICEQIGD PATSKGPVER KVVRIVTPGT
ISDEALLQER QDNLLAAIWQ DGKGYGYATL DISSGRFRLS EPADRETMAA ELQRTNPAEL
LYAEDFAEMA LIEGRRGLRR RPLWEFEIDT ARQQLNLQFG TRDLVGFGVE NASRGLCAAG
CLLQYVKDTQ RTSLPHIRSI TMERQQDSII MDAATRRNLE ITQNLAGGVE NTLAAVLDCT
VTPMGSRMLK RWLHMPVRNT NILRERQQTI GALQDTVSEL QPVLRQVGDL ERILARLALR
TARPRDLARM RHAFQQLPEL HAQLETVDSA PVQALRKKMG DFAELRDLLE RAIIDAPPVL
VRDGGVIAPG YHEELDEWRA LADGATDYLD RLEIRERERT GLDTLKVGYN AVHGYYIQIS
RGQSHLAPIN YVRRQTLKNA ERYIIPELKE YEDKVLTSKG KALALEKQLY DELFDLLLPH
LADLQQSANA LAELDVLVNL AERAWTLNYT CPTFTDKPGI RITEGRHPVV EQVLNEPFIA
NPLNLSPQRR MLIITGPNMG GKSTYMRQTA LIALLAYIGS YVPAQNVEIG PIDRIFTRVG
AADDLASGRS TFMVEMTETA NILHNATENS LVLMDEIGRG TSTYDGLSLA WACAENLANK
IKALTLFATH YFELTQLPEK MEGVANVHLD ALEHGDTIAF MHSVQDGAAS KSYGLAVAAL
AGVPKEVIKR ARQKLRELES ISPNAAATQV DGTQMSLLAA PEETSPAVEA LENLDPDSLT
PRQALEWIYR LKSLV
|
|---|
| |