Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3054 |
Symbol | hycC |
ID | 6486741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2973048 |
End bp | 2974874 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642738369 |
Product | formate hydrogenlyase subunit 3 |
Protein accession | YP_002042093 |
Protein GI | 194443059 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.920212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 0.22505 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCAC TTTCACTGAT TACTAGCGGC GTCGCGTGGT TTGCCGCCGC CGCCGTTCTG GCGTTTCTGT TTTCGTTTCA TAAAGCGCTG AGCGGCTGGA TTGCCGGTAT CGGCGGCGCG GTCGGCAGCC TGTGTACGGC TGGTGCGGGG TTCACCGCAC TGACCAGCGC CGTTACGGTG AGCGGCGTGA TGCCGTTTAC CGGCCACATG CTGCAAATTA CGCCGCTGAA TGCTATCTGG CTGATTACGC TGGGGCTGTG CGGTCTGTTC GTCAGCCTGT TCAATATCGA CTGGCATCGC CATCCACAGG TAAAAGCCAA CGGACTGTTG ATCAACCTGC TGATGGCGGC AGCCGTCTGC GCCGTGGTCG CCAGTAATCT GGGGACGATG GTGGTGATGG CGGAAATCAT GGCGCTCTGC GCCGTGTTCC TCACCGGCGG TAGCAAAGAG GGCAAACTGT GGTTTGCGCT GGGCCGTCTC GGTACGCTGC TGCTGGCAAT CGCCTGTTGG CTGGTGTGGC AGCGCTACGG CACGCTGGAT CTGGGGCTGC TGGATCAACG CGCTCAGCAA CTGCCGCTGG GCTCCGATAT CTGGCTGCTC GGCGTTATCG GTTTTGGTCT GCTGGCCGGG ATTATCCCGC TACACGGTTG GGTGCCGCAG GCGCACGCCA ACGCCAGCGC TCCCGCCGCC GCGCTGTTCT CGACCGTGGT GATGAAAATC GGGGTGCTGG GTATCCTCAC GCTATCTCTG CTTGGCGGCA ATGCGCCGCT GTGGTGGGGC GTGGCGCTGT TGGTGCTAGG GATGATCACC GCCTTTGTCG GCGGTCTGTA CGCGCTGATG GAGCATAACA TTCAGCGCCT GTTGGCCTAT CACACGCTGG AAAATATCGG CATCATTTTG CTCGGTCTGG GCGCAGGCGT TACCGGGATT GCTCTCAATC AGCCGGTACT GATCGCGCTG GGTCTGACCG GCGGGCTCTA TCACCTGCTG AACCATAGCC TGTTCAAAAG CGTGCTGTTT CTGGGCGCGG GCAGCATCTG GTTCCGTACC GGTCATCGCG ATATCGAAAA ACTGGGCGGT ATTGGTAAAC GGATGCCGGT TATTTCTATC GCCATGCTGG TCGGTCTGAT GGCGATGGCT GCGCTGCCGC CGCTGAACGG CTTTGCCGGC GAGTGGGTGA TTTACCAGTC CTTCTTCAAA CTGGGCAACA GCGGCGCATT TGTTGGTCGT CTGTTAGGAC CGCTGCTGGC GGTTGGCCTG GCGATTACCG GCGCGCTGGC GGTGATGTGT ATGGCGAAAG TGTATGGCGT GACGTTCCTT GGCGCGCCGC GCACGAAGGA AGCTGAAAAT GCCAGCTGCG CGCCGATCCT GATGGGCGTC AGCGTGGTGG CATTGGCGAT TTGCTGCGTA CTGGGCGGGG TTGCCGCGCC GTGGCTGCTG CCGATGATTT CCACTGCGGT ACCGTTGCCG CTGGAAACCG CGCACACCAC CGTATCGCAG CCGATGATCA CGCTGCTGTT GGTCGCCTGT CCGCTACTGC CGTTCATCAT TATGGCAATG TTCAAAGGCA ACCGTCTGCC GTCGCGTTCT CGCGGCGCGG CCTGGGTGTG CGGCTACGAC CATGAGCAGT CGATGGTGAT TACCGCGCAC GGTTTTGCCA TGCCGGTGAA AGAGGCCTTT GCCCCGGTAC TCAAATTGCG TAAATGGCTG AACCCGGTAT CGCTGGTGCC GGGCTGGCAG AACGCGGCGG CCGCGGTGCT GTTCCGTCGT CTGGCGCTGA TTGAGCTGGC GGTGCTGGTG GTGATTGTGG TTTCACGAGG AGCCTGA
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Protein sequence | MSSLSLITSG VAWFAAAAVL AFLFSFHKAL SGWIAGIGGA VGSLCTAGAG FTALTSAVTV SGVMPFTGHM LQITPLNAIW LITLGLCGLF VSLFNIDWHR HPQVKANGLL INLLMAAAVC AVVASNLGTM VVMAEIMALC AVFLTGGSKE GKLWFALGRL GTLLLAIACW LVWQRYGTLD LGLLDQRAQQ LPLGSDIWLL GVIGFGLLAG IIPLHGWVPQ AHANASAPAA ALFSTVVMKI GVLGILTLSL LGGNAPLWWG VALLVLGMIT AFVGGLYALM EHNIQRLLAY HTLENIGIIL LGLGAGVTGI ALNQPVLIAL GLTGGLYHLL NHSLFKSVLF LGAGSIWFRT GHRDIEKLGG IGKRMPVISI AMLVGLMAMA ALPPLNGFAG EWVIYQSFFK LGNSGAFVGR LLGPLLAVGL AITGALAVMC MAKVYGVTFL GAPRTKEAEN ASCAPILMGV SVVALAICCV LGGVAAPWLL PMISTAVPLP LETAHTTVSQ PMITLLLVAC PLLPFIIMAM FKGNRLPSRS RGAAWVCGYD HEQSMVITAH GFAMPVKEAF APVLKLRKWL NPVSLVPGWQ NAAAAVLFRR LALIELAVLV VIVVSRGA
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