Gene SNSL254_A3021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3021 
Symbol 
ID6486038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2945209 
End bp2945634 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content54% 
IMG OID642738336 
Producthypothetical protein 
Protein accessionYP_002042065 
Protein GI194442895 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0161641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.00000846709 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTGACG GACTGTCGCT CCTGTCTCTG TTTGCCAGTA GTTTTCTCAG CGCGACGCTG 
TTACCCGGTA ATTCTGAGGT GGTTTTGGTT GCTATGCTGG TCTCCGGCGT CAGCCATCCC
TGGGTCTTAG TCTTAACAGC AACAATGGGT AATAGCCTTG GAGGGGTAAC TAACGTTATT
CTTGGGCGTT TCTTTCCGCT GCGCAAAACG TCGCGCTGGC AGGAAAAAGC GACTGGCTGG
CTAAAGCGTT ATGGCGCAGC CACACTATTA TTAAGCTGGA TGCCGGTCAT CGGTGATTTG
TTGTGCCTGT TAGCGGGATG GATGCGCATC CCGTGGGGGC GGACGATCTT TTTTTTGTGT
CTTGGTAAGG CGCTGCGCTA TGTTGCGCTC GCAGCGGCGA CGGTTCAGGG CATGATGTGG
TGGTAA
 
Protein sequence
MSDGLSLLSL FASSFLSATL LPGNSEVVLV AMLVSGVSHP WVLVLTATMG NSLGGVTNVI 
LGRFFPLRKT SRWQEKATGW LKRYGAATLL LSWMPVIGDL LCLLAGWMRI PWGRTIFFLC
LGKALRYVAL AAATVQGMMW W