Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3014 |
Symbol | emrA |
ID | 6485332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2938419 |
End bp | 2939591 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642738330 |
Product | multidrug resistance protein A |
Protein accession | YP_002042059 |
Protein GI | 194445068 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.00193784 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCTCAA ATGCGGAGAT CCAAACCCCG CAGCAACCGG CTAAGAAGAA AGGCAAACGC AAAACAGCGC TGCTACTTCT TACCTTGCTC TTTGTTATTA TTGCCGTGGC ATATGGAATT TATTGGTTTT TAGTATTGCG TCATATTGAA GAGACAGATG ATGCTTACGT GGCAGGGAAC CAGGTTCAAA TCATGGCGCA GGTGTCAGGC AGCGTGACGA AAGTCTGGGC TGATAACACC GACTTTGTAA AAGAGGGCGA TGTTCTGGTC ACGCTCGATC AGACTGACGC CAAACAAGCG TTTGAAAGAG CCAAAACGGC GCTGGCCTCC AGCGTGCGCC AGACGCACCA GTTGATGATT AACAGCAAGC AGTTGCAGGC GAATATCGAC GTGCAAAAAA CCGCCCTGGC GCAAGCGCAA AGCGACCTTA ACCGTCGTGT GCCGCTGGGT AATGCCAATC TTATTGGCCG TGAAGAGCTG CAACACGCCC GCGATGCCGT CGCCAGCGCG CAGGCACAGC TGGATGTCGC CATTCAACAG TACAATGCCA ACCAGGCAAT GATACTCAAC AGTAATCTGG AAGATCAGCC TGCGGTTCAA CAAGCGGCGA CCGAAGTGCG TAACGCCTGG CTGGCGCTGG AGCGTACCCG CATCGTCAGC CCAATGACTG GTTATGTCTC CCGCCGCGCC GTCCAGCCTG GCGCGCAAAT CAGCCCCACC ACGCCGCTGA TGGCCGTGGT GCCTGCAACC GATCTGTGGG TGGACGCTAA CTTTAAAGAA ACCCAATTAG CGAATATGCG CATTGGGCAG CCAGTGACGG TGATTACTGA TATTTATGGC GACGACGTAA AATACACCGG TAAAGTCGTC GGTCTGGATA TGGGAACAGG CAGCGCCTTC TCCCTGCTGC CCGCGCAAAA TGCGACGGGT AACTGGATTA AAGTGGTTCA ACGTCTGCCG GTACGCGTCG AACTGGACGC CCGCCAGTTA GAACAACATC CGCTGCGTAT TGGTTTATCG ACGCTGGTCA CCGTGGATAC CGCTAATCGC GACGGTCAGG TACTGGCCAG CCAGGTACGA ACGACGCCGG TTGCCGAAAG TAACGCACGC GAAATTAATC TCGCGCCGGT CAATAAACTG ATCGACGACA TCGTACAGGC TAACGCGGGT TAA
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Protein sequence | MSSNAEIQTP QQPAKKKGKR KTALLLLTLL FVIIAVAYGI YWFLVLRHIE ETDDAYVAGN QVQIMAQVSG SVTKVWADNT DFVKEGDVLV TLDQTDAKQA FERAKTALAS SVRQTHQLMI NSKQLQANID VQKTALAQAQ SDLNRRVPLG NANLIGREEL QHARDAVASA QAQLDVAIQQ YNANQAMILN SNLEDQPAVQ QAATEVRNAW LALERTRIVS PMTGYVSRRA VQPGAQISPT TPLMAVVPAT DLWVDANFKE TQLANMRIGQ PVTVITDIYG DDVKYTGKVV GLDMGTGSAF SLLPAQNATG NWIKVVQRLP VRVELDARQL EQHPLRIGLS TLVTVDTANR DGQVLASQVR TTPVAESNAR EINLAPVNKL IDDIVQANAG
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