| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2988 |
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| Symbol | gabD |
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| ID | 6482302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2916775 |
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| End bp | 2918223 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642738304 |
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| Product | succinate-semialdehyde dehydrogenase I |
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| Protein accession | YP_002042033 |
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| Protein GI | 194444801 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.853074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.0957266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTTA ACGACTCTAC CCTGTTCCGT CAGCAGGCCT TTATCGATGG TGACTGGCGC
GACGCGCGCG GCGGCGATGT CATCCCCGTT AGCAACCCCG CCAACGGGAA ACCGCTCGGC
AATGTGCCAA AAATGGGGGC GGAAGAGACG CGCGACGCCA TCGACGCCGC CAATCGCGCC
CTGCCCGCCT GGCGCGCGCT CACCGCCAAA GAGCGAGCCA ATATCCTGCG TCGCTGGTTC
AATCTGATGA TGGAACATCA GGACGATTTG GCGCGTCTGA TGACGCTGGA ACAGGGTAAA
CCGCTGGCGG AAGCGAAAGG CGAAATTAGC TACGCCGCCT CGTTTATTGA ATGGTTCGCC
GAAGAGGGGA AGCGTATCTA TGGCGACACG ATTCCAGGTC ATCAGGCCGA TAAACGGCTG
CTGGTGATTA AACAGCCCAT CGGCGTCACC GCCGCGATTA CCCCGTGGAA CTTTCCCTCA
GCAATGATCA CCCGTAAAGC CGGCCCCGCG CTGGCCGCAG GCTGCACGAT GGTACTCAAA
CCCGCCAGCC AGACGCCGTT TTCCGCGCTG GCGCTGGCGG AACTGGCCCG GCGCGCCGGA
ATTCCCGCAG GCGTATTTAA CGTCGTTACC GGTTCGGCTG GCGATATCGG CGGCGAGCTG
ACCAGCAACC CGCTGGTACG CAAACTGTCG TTTACCGGCT CGACGGAGAT TGGCCGCCAG
CTAATGGAAC AATGCGCCAA AGACATTAAA AAAGTATCGC TGGAGTTGGG CGGCAATGCG
CCGTTTATCG TCTTTGACGA TGCCGATCTG GATAAAGCCG TTGAGGGTGC GCTGGCTTCG
AAGTTTCGCA ACGCCGGGCA GACCTGTGTC TGCGCCAATA GATTGTATGT TCAGGACGGC
GTTTACGATC GTTTTGCGGA AAAACTCAAC CAGGCGGTAA ATAAGCTCGC GGTCGGCGAC
GGTCTGCAAG CCGACGTTGC TATCGGACCG CTGATTGATG AAAAAGCCGT GGCGAAAGTC
CAGGAGCATA TCGCCGATGC GCTGGAAAAA GGCGCCCGCG TCATTACGGG TGGTGAAGCG
CACAAATTGG GCGGCAACTT CTTTCAACCG ACCATTCTGG CGGATGTTCC TGATAACGCG
AAAGTCGCCA AAGAAGAGAC ATTCGGGCCG CTCGCGCCTC TGTTCCGCTT CAGCGACGAG
GCGGATGTCA TCAGGCAGGC TAACGATACC GAGTTCGGCC TGGCAGCCTA TTTTTATGCA
CGCGATTTAA GCCGCGTTTT CCGCGTCGGC GAAGCGCTGG AATACGGCAT CGTCGGTATT
AATACCGGCA TTATCTCCAA CGAAGTCGCG CCTTTCGGCG GCATTAAGGC CTCCGGATTA
GGCCGTGAAG GTTCCAAATA CGGCATCGAA GATTATTTAG AAATCAAATA TATGTGCATC
GGCCTTTAA
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| Protein sequence | MQLNDSTLFR QQAFIDGDWR DARGGDVIPV SNPANGKPLG NVPKMGAEET RDAIDAANRA
LPAWRALTAK ERANILRRWF NLMMEHQDDL ARLMTLEQGK PLAEAKGEIS YAASFIEWFA
EEGKRIYGDT IPGHQADKRL LVIKQPIGVT AAITPWNFPS AMITRKAGPA LAAGCTMVLK
PASQTPFSAL ALAELARRAG IPAGVFNVVT GSAGDIGGEL TSNPLVRKLS FTGSTEIGRQ
LMEQCAKDIK KVSLELGGNA PFIVFDDADL DKAVEGALAS KFRNAGQTCV CANRLYVQDG
VYDRFAEKLN QAVNKLAVGD GLQADVAIGP LIDEKAVAKV QEHIADALEK GARVITGGEA
HKLGGNFFQP TILADVPDNA KVAKEETFGP LAPLFRFSDE ADVIRQANDT EFGLAAYFYA
RDLSRVFRVG EALEYGIVGI NTGIISNEVA PFGGIKASGL GREGSKYGIE DYLEIKYMCI
GL
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