| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2971 |
|---|
| Symbol | |
|---|
| ID | 6486348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 2899253 |
|---|
| End bp | 2900188 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642738288 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002042017 |
|---|
| Protein GI | 194442470 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.0184375 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGGTC GCCAGTACCA CAACAAGTGC TATCGCATGG CGCTATTTTT AGTGAGTTTT
TGTTTTAGCG CGCTGAGTTA TGCGCAGCCG GATATGCAGC CATTAGGACC GAATATTGCT
GATAAAGGTT CGGGATATTA CCATTTTAGG GTCAATGACT TTCAATCTGC CGATGGCGCA
AGACATTACC GGGTATGGAC CGCTATTCCC AATAAAGCCG CCCCGCCGTC GGGTTATCCT
GTCTTATATA TGCTGGACGG CAACGCAGTG ATGGACAGAC TGCCGGAGAC GCTGCTCAAA
CAGCTGGCAG ACCACTCGCC GCCGGTGATT GTGGCGATTG GCTATCAGAC TAACCTGCCG
TTTGATCTTA ACGGCAGAGC TTATGACTAT ACGCCGGCGC CGGGAATCGA TCGCGATGAC
AGTGAAAATA ACCCGCGTTT TCATCGTAAA ACCGGCGGCG GGCCAGCGTT CCGCCAGCTA
CTGGAGAGAC ATATCGCGCC GCAGGTGGAA CAAGGAATAA CCATCAACTC CGAACGGCGC
GGGGTATGGG GACATTCTTA TGGCGGCCTG TTCGTTTTAG ACTCCTGGCT GTCGTCATCC
TTCTTTCATA TCTATTACAG CGCCAGCCCG TCACTCAGCA GGGATAACTT TGTCCTGTTG
AATCGCCTTA CGACAGTGAA GCCGTCGCTG TTCTGCCATA AAAAACTCAT CATAATGGAA
GGTTCAGCGT CGAATGGGGA TAGCAGGCAA CGCCAGATGG CCGAGCTCCT GCAAAAAGTT
CAGGAGACCG TGAGAACGCT TGAGAACAAC GGCGTTAACG CGGCCCTGCA GCATTACCCG
GGCCTGGGCC ACGGGCCCAT GTTTAACGCC TCTTTTCGCA GTGCATTGCT GGATATCAGT
CGCGAACCGG CAAGCCAAAA ACCACGCTGC CATTAA
|
|---|
| Protein sequence | MYGRQYHNKC YRMALFLVSF CFSALSYAQP DMQPLGPNIA DKGSGYYHFR VNDFQSADGA
RHYRVWTAIP NKAAPPSGYP VLYMLDGNAV MDRLPETLLK QLADHSPPVI VAIGYQTNLP
FDLNGRAYDY TPAPGIDRDD SENNPRFHRK TGGGPAFRQL LERHIAPQVE QGITINSERR
GVWGHSYGGL FVLDSWLSSS FFHIYYSASP SLSRDNFVLL NRLTTVKPSL FCHKKLIIME
GSASNGDSRQ RQMAELLQKV QETVRTLENN GVNAALQHYP GLGHGPMFNA SFRSALLDIS
REPASQKPRC H
|
|---|
| |