| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2938 |
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| Symbol | |
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| ID | 6483359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2869316 |
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| End bp | 2870377 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642738255 |
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| Product | phage portal protein pbsx family |
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| Protein accession | YP_002041984 |
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| Protein GI | 194445286 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5518] Bacteriophage capsid portal protein |
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| TIGRFAM ID | [TIGR01540] phage portal protein, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 3.19492e-28 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTAAAA AGAAACACTT CATTAAGCGC GACCAGCGCG GCGATAAGTC AAAAAAAATG
AGCATCATTA CGTTCGGCAA ACCGGAACCG GTTCTGACCA CTGGCACCGA CTACCGGGAT
ATCTGGTACG ACAATGCCGC CGATCATTTT ACTCAGCCAA TTGACCGGCT GGCACTGGCA
CAACTGATTA ACCTTAACGG TCAACATGGC GGTATCATCC ACGCCCGTAA AAACATGATT
GTGTCTGATT ATCTGTCTGG CGGCCTGACT TACGACCAAC TGGAAGCCGC AGCTTTTGAC
TACATCACAT TTGGGGATAT TGCGCTTGGA AAAATTCGTA ACGGATGGGG AGATGTGATC
GGACTGGAAC CCTTACCCGG CCTCTATATC CGACGCAGGA AAGACAGGAA CAACGCAACT
GATCAACCTG GTGATTACGT GGTGTTACAG GAAGGCGAAC CGCAGATATG GCCTGAAGAA
GATATTATCT TCATCAAAAT GTATGATCCG CAACAGCATA TTTACGGACT GCCGGACTAC
ATCGGCGGCG TACATTCTGC ATTACTCAAC AGTGAAGCGG TCATTTTCCG TCGCCGTTAC
TACCACAATG GCGCCCACAC TGGCGGCATT CTCTACACGC GCGATCCCAG CATGACGGAT
GAAATGGAAG AGGAAATTGA ACAGCAGCTG CGTGACAGCA AAGGGATCGG CAACTTCTCC
ACCATCCTGG TAAACATTCC CGGTGGAGAC GGTGACGCCA TCAAATTCAT TGAAATGGGG
GATATTTCCG CTAAGGATGA ATTTGCCAAC ATCAAAAATA TCAGCGCCCA GGATATTCTG
AACGCGCACC GTTTTCCTGC CGGGCTTGCC GGCATTGTCC CGCAAAATAC TGCCGGACTT
GGTGACGTAG AAAAGGCCGA ACGGATTTAT AAAAAAAGCG AAGTCGCCCC TGTTCAGCGC
CGGTTTATGA TGGCCGTAAA CAATGATCCA GAAATACCGG AAAGGCTACA CCTTAACTTT
GATTTAAGTT ACGCAGAATC AACGGATAAG GGTGCAGCAT GA
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| Protein sequence | MSKKKHFIKR DQRGDKSKKM SIITFGKPEP VLTTGTDYRD IWYDNAADHF TQPIDRLALA
QLINLNGQHG GIIHARKNMI VSDYLSGGLT YDQLEAAAFD YITFGDIALG KIRNGWGDVI
GLEPLPGLYI RRRKDRNNAT DQPGDYVVLQ EGEPQIWPEE DIIFIKMYDP QQHIYGLPDY
IGGVHSALLN SEAVIFRRRY YHNGAHTGGI LYTRDPSMTD EMEEEIEQQL RDSKGIGNFS
TILVNIPGGD GDAIKFIEMG DISAKDEFAN IKNISAQDIL NAHRFPAGLA GIVPQNTAGL
GDVEKAERIY KKSEVAPVQR RFMMAVNNDP EIPERLHLNF DLSYAESTDK GAA
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