| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2875 |
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| Symbol | clpB |
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| ID | 6486921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2804641 |
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| End bp | 2807214 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642738195 |
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| Product | protein disaggregation chaperone |
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| Protein accession | YP_002041924 |
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| Protein GI | 194443281 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0261758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.114716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTGG ATCGTCTTAC TAACAAATTC CAGCTTGCTC TTGCCGATGC CCAGTCGCTC
GCGCTGGGGC ACGACAACCA ATTCATCGAA CCTCTTCATT TAATGAGCGC CTTGCTGAAC
CAGGAAGGGG GATCGATACG TCCTTTATTA ACCTCCGCCG GCATTAATGC TGGCCAGTTG
CGCACCGCTA TCGATCAGGC GCTGAGCCGT TTACCGCAGG TGGAAGGCAC CGGCGGCGAC
GTACAGCCTT CTTCGGAACT GGTACGCGTA CTGAACCTTT GCGACAAGCT GGCGCAAAAA
CGGGGAGACA ATTTTATTTC GTCAGAGCTG TTTGTTCTGG CGGCGCTTGA GTCTCGCGGC
ACGTTAACCG ATCTGCTGAA ATCAGCCGGT GCGACCACGG CCAATATCAC TCAGGCAATT
GAACAGATGC GCGGAGGTGA AAGCGTGAAC GATCAAGGGG CTGAAGACCA ACGTCAGGCC
TTGAAAAAAT ATACCGTCGA TCTGACCGAG CGGGCTGAAC AAGGCAAGCT TGACCCGGTA
ATTGGTCGTG ATGAAGAAAT TCGCCGTACC ATTCAGGTAC TGCAACGTCG TACTAAAAAT
AACCCGGTGT TAATCGGTGA GCCAGGCGTA GGTAAAACCG CCATTGTTGA AGGGCTGGCG
CAACGTATTA TCAACGGTGA AGTACCGGAA GGCCTGAAAG GCCGTCGCGT GCTGGCGCTG
GATATGGGCG CGCTGGTGGC CGGGGCGAAA TATCGCGGCG AATTTGAAGA GCGTCTGAAA
GGCGTGCTGA ACGATCTGGC GAAACAGGAA GGCAACGTCA TCCTGTTTAT TGACGAGCTG
CACACCATGG TTGGCGCAGG TAAGGCTGAT GGCGCAATGG ACGCCGGGAA TATGCTGAAA
CCGGCGCTGG CGCGTGGTGA ACTGCACTGT GTGGGCGCCA CCACGCTGGA TGAATACCGT
CAGTACATTG AAAAAGACGC GGCGCTGGAA CGTCGTTTTC AAAAAGTGTT TGTCGCAGAA
CCTTCAGTGG AAGACACCAT TGCTATTCTG CGTGGCCTGA AAGAACGTTA CGAGCTGCAT
CACCATGTGC AGATCACTGA CCCGGCGATT GTGGCGGCGG CAACATTGTC TCATCGCTAT
ATCGCCGACC GTCAGTTGCC GGATAAAGCT ATCGACCTCA TCGATGAAGC GGCATCCAGC
ATTCGTATGC AGATTGACTC TAAGCCGGAG GAGCTGGACA GGCTCGACCG CCGCATTATT
CAGCTCAAAC TGGAACAGCA GGCGTTGATG AAAGAGTCTG ACGAGGCGAG TAAAAAACGT
CTCGATATGC TGAATGAAGA ACTGGACGAT AAAGAGCGCC AGTATTCTGA GTTAGAAGAA
GAGTGGAAAG CGGAAAAAGC CTCGCTCTCC GGTACGCAAA CTATTAAAGC GGAGCTGGAG
CAGGCGAAGA TCGCCATCGA GCAGGCGCGT CGCGTTGGCG ACCTGGCGCG AATGTCTGAA
CTGCAGTACG GCAAAATTCC GGAGCTGGAA AAACAGTTGG AAGCCGCGAC CCAGTCGGAA
GGTAAAACCA TGCGTCTGTT ACGTAACAAA GTAACGGATG CGGAAATTGC CGAAGTGCTG
GCGCGCTGGA CCGGTATTCC GGTTGCCAGA ATGCTGGAAG GCGAACGCGA AAAACTGTTG
CGTATGGAAC AAGAGTTACA CAGCCGTGTG ATCGGGCAGA ATGAAGCCGT TGAAGCAGTA
TCGAACGCCA TACGTCGTAG CCGCGCGGGG CTGTCCGATC CGAACCGTCC GATTGGTTCC
TTCCTGTTCC TTGGGCCGAC GGGGGTCGGT AAAACCGAAC TGTGTAAAGC GCTGGCTAAC
TTTATGTTCG ACAGCGACGA CGCGATGGTG CGTATCGACA TGTCTGAGTT TATGGAGAAA
CACTCCGTGT CTCGTTTGGT CGGGGCGCCT CCGGGATATG TCGGCTATGA AGAAGGCGGT
TATTTGACGG AAGCGGTACG CCGTCGTCCT TATTCCGTCA TCTTGTTGGA TGAAGTGGAA
AAAGCGCATC CGGATGTATT CAACATTCTG TTGCAGGTGC TGGACGACGG TCGACTGACT
GACGGGCAGG GGAGAACGGT CGACTTCCGT AATACGGTGG TCATTATGAC TTCTAACCTC
GGTTCCGATC TCATTCAGGA GCGCTTTGGC GAACTGGATT ACGGTCGAAT GAAAGAGATG
GTGCTGGGTG TGGTTAGCCA AAACTTCCGT CCGGAATTTA TCAACCGTAT TGATGAAGTT
GTGGTATTCC ATCCGTTAGG TGAACAACAC ATCGCTTCTA TTGCTCAGAT CCAGCTGCAG
CGTCTGTACA AACGTCTGGA AGAACGTGGT TATGAAATCC ATATCTCCGA CGAGGCGCTG
AAACTGTTGA GCGCCAACGG TTACGATCCG GTCTACGGGG CGCGTCCGTT AAAACGTGCT
ATTCAACAGC AGATCGAAAA CCCACTGGCG CAGCAAATCC TGTCTGGTGA ACTGGTTCCT
GGCAAAGTGA TTCGCCTTGA AGCCAATGAT GATCGTATTG TGGCAGTGCA GTAA
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| Protein sequence | MRLDRLTNKF QLALADAQSL ALGHDNQFIE PLHLMSALLN QEGGSIRPLL TSAGINAGQL
RTAIDQALSR LPQVEGTGGD VQPSSELVRV LNLCDKLAQK RGDNFISSEL FVLAALESRG
TLTDLLKSAG ATTANITQAI EQMRGGESVN DQGAEDQRQA LKKYTVDLTE RAEQGKLDPV
IGRDEEIRRT IQVLQRRTKN NPVLIGEPGV GKTAIVEGLA QRIINGEVPE GLKGRRVLAL
DMGALVAGAK YRGEFEERLK GVLNDLAKQE GNVILFIDEL HTMVGAGKAD GAMDAGNMLK
PALARGELHC VGATTLDEYR QYIEKDAALE RRFQKVFVAE PSVEDTIAIL RGLKERYELH
HHVQITDPAI VAAATLSHRY IADRQLPDKA IDLIDEAASS IRMQIDSKPE ELDRLDRRII
QLKLEQQALM KESDEASKKR LDMLNEELDD KERQYSELEE EWKAEKASLS GTQTIKAELE
QAKIAIEQAR RVGDLARMSE LQYGKIPELE KQLEAATQSE GKTMRLLRNK VTDAEIAEVL
ARWTGIPVAR MLEGEREKLL RMEQELHSRV IGQNEAVEAV SNAIRRSRAG LSDPNRPIGS
FLFLGPTGVG KTELCKALAN FMFDSDDAMV RIDMSEFMEK HSVSRLVGAP PGYVGYEEGG
YLTEAVRRRP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVVIMTSNL
GSDLIQERFG ELDYGRMKEM VLGVVSQNFR PEFINRIDEV VVFHPLGEQH IASIAQIQLQ
RLYKRLEERG YEIHISDEAL KLLSANGYDP VYGARPLKRA IQQQIENPLA QQILSGELVP
GKVIRLEAND DRIVAVQ
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