| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2850 |
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| Symbol | rpoE |
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| ID | 6484772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2781760 |
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| End bp | 2782335 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642738173 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_002041906 |
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| Protein GI | 194443640 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.718935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.190623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAGC AGTTAACGGA CCAGGTCCTG GTTGAACGGG TCCAGAAGGG AGATCAGAAA
GCCTTTAACT TACTGGTAGT GCGCTACCAG CATAAAGTGG CGAGTCTGGT TTCCCGCTAT
GTGCCATCGG GCGACGTTCC CGATGTCGTA CAGGAATCAT TTATTAAGGC CTATCGCGCG
CTGGATTCTT TCCGGGGGGA TAGTGCTTTT TATACCTGGT TGTATCGCAT TGCGGTCAAT
ACCGCGAAGA ACTACCTGGT TGCGCAGGGG CGTCGTCCGC CTTCCAGTGA TGTAGACGCG
ATTGAAGCAG AAAACTTTGA AAGCGGCGGC GCGCTGAAAG AAATTTCGAA CCCTGAGAAC
TTAATGTTGT CAGAAGAACT GAGACAGATA GTTTTCCGAA CTATTGAGTC CCTCCCGGAA
GATTTACGTA TGGCAATCAC CTTACGGGAG CTGGATGGCC TGAGCTATGA AGAGATAGCG
GCTATCATGG ATTGTCCGGT GGGGACGGTG CGTTCACGTA TCTTCCGGGC GCGGGAAGCT
ATTGATAATA AAGTTCAACC GCTTATCAGG CGTTGA
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| Protein sequence | MSEQLTDQVL VERVQKGDQK AFNLLVVRYQ HKVASLVSRY VPSGDVPDVV QESFIKAYRA
LDSFRGDSAF YTWLYRIAVN TAKNYLVAQG RRPPSSDVDA IEAENFESGG ALKEISNPEN
LMLSEELRQI VFRTIESLPE DLRMAITLRE LDGLSYEEIA AIMDCPVGTV RSRIFRAREA
IDNKVQPLIR R
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