| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2725 |
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| Symbol | |
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| ID | 6483935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2662962 |
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| End bp | 2665340 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642738054 |
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| Product | anaerobic dimethyl sulfoxide reductase chain a |
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| Protein accession | YP_002041788 |
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| Protein GI | 194445738 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA TAAAAAGCCA GGGAAATGGC GAACAGCCCG CTATTTCTCG CCGCCACTTT
ATCCAGGCCA GCTCCGCGCT TATTGCGTTA CCGTTTGTCT CCTCGCCAGC TACCGCTCAG
GCGCGCGCTG TGACGGCAAC TGAAAACAGG CCTGCGGAAA AAGTCGTTCA GACATGCAGC
ACTTTTGACT GCGGGGGCAA ATGCGATATT CGGGCGCATG TTAGTGACGG TATCGTGACG
CGAATTTCAA CGCGACCGGA TAATGCGCTG GATGCGCAAA TGCCGGTGAT GCGTGCCTGT
GTTCGTGGAC GCGCATACCG TAAATTTGTT TATCATCCTG ACAGACTTAA ATATCCCATG
AAGCGCGTAG GAAAACGCGG TGAAGGAAAA TTTGAGCGAA TTTCCTGGGA TGAAGCGACA
ACCTTAATCG CCGATAATTT AAAATCGATT ACTGAAAAAT ATGGCCCGGC TTCGCGCTAT
GTTCATGTTG GTACCGCCGT TTCCGGCGGC ACCTTTTCCG GCGATAAAAT GGCACGTCGC
CTGTTGAATC TGACCGGCGG ATATCTCGAA AGCTACCATT CTGTGAGTAT GGGCAACACG
GCGGCCGCGA CGCCTTATAC TTACGGCATT GCCGCCAGCG GCAGTTCACT GGATACGCTT
TTGGACACCA AACTGGTGAT TCTGTGGGGC CATAACCCGA CGGAGACCAT TTTTGGTCAT
ACCAACTATT TCTTGCAGAA GATGAAGCAG AACGGTACGC GGTTTATCGT GGTTGATCCG
CGCTATTCCG ACACCGTTTC GTCGCTGGCG GATCAGTGGA TCCCGCTGCT GCCCACCACC
GACAATGCGC TGATGGACGC GATGATGTAC GTCATCATCA GCGAGAATCT GCACGATCGC
GCATTTATTG CGCGTTACGC TATCGGTTTT GATGAAGACT CAATGCCGGA AGGCGTACCG
GCTAACGAAT CGCTGGTGGC GTATCTGACC GGCGCCAAAG ACGGTGTCGT TAAGTCCCCC
GAGTGGGCGG AAAAGATCAC CCATGTGCCG GCGCAAACCA TTCGCCAGTT AGCGCGTGAT
TACGCGAATA CCAAACCCGC CGCGTTGATT CAGGGGTGGG GACCACAGCG CCACAACTGC
GGCGAGCGCA CCGCGCGCGG TTCGACTCTA CTGGCGACCA TTACCGGTAA TGTCGGCATC
AAAGGCGGTT GGGCTGCGGG TTACGGCGGC TGCGCTAACC GTAAATTCGC CGCGGGTCCG
GAGATGCCGG ATAACCCGGT AAAAGCCAAA ATTTCGGTGA TGAACTGGGT GCAGGCCGCA
GACGACGCCA GCAAAGTGAC GCCGGATATG GGGCTGAAAG ATGCCGATAA GCTGGACAGT
AACATCCGTA TTCTGTTCTC GCTGGCCGGG AACTATCTGG CGAATCAGAA CCCCGATCTG
CACCTGGCGG TACGCGTACT GGAGGATGAA TCAAAGATCC AGTTTATTGT CGCCAGCGAT
CTGTTTATGA CGCCGAGCGC GAAATACGCT GATCTACTGC TGCCGGAAAC CAGCTTTATG
GAACGCTGGA ACATCGGTGA AACCTGGGGC ACGGCAAGCT ACCTGATACT CTCTGAAAAA
CTGATCGAGC CTGAATTTGA GCGTCGCTCC GACTACGACT GGCTACGTGA GGTGGCGGCG
AAATTAGGCA TTGAGAATGA ATTTAGCCAG GGGCGCGATG AGAAAGCGTG GATTGAACAC
ATCTGGGAAC AGACGCGCCT GGCGATGCCG GACGAAAATC TGCCGGATTT CGCCACGCTG
CAAAAGACCC GTCAGCATCT GTTCAAAAGC GCGCCATTTA TCGCCTTTGA AGACAATATT
CGCGATCCGG AAAATCATCC GTTCCCGACG CCGTCAGGGA AAATAGAGAT CTTCTCGAAG
CGTCTGTACG ACATGCAGCA TCCGGAAATC CCGGCGTTGT CGCACTACGT TCCCGCGCAT
GAAGGCCCGG AGGATGCGCT GGCGAAAGAT TTTCCGCTCC AGTTAATTAC GTGGAAAGGA
AAAAACCGCG CCAACTCAAC GCAATACGCT AACCCGTGGC TGATTGAAGT GCAGCAGCAG
ACATTGTGGA TCAACCCGCA GGATGCGCAA AAGCGCGGCA TTACGCATGG CGATATGGTG
CGCATTCATA ACTCACGCGG AATTTGCGAA ATCCCGGCGG AAGTGACGCC GCGCATTATT
CCCGGCGTTG TCGCGATGCA GGCCGGCGCC TGGTGGCAGC CGGATGAGAA CGGTATTGAT
AAAGGCGGCT GTGCGAACGT CCTCAGCTCG GCCCGTATTA CCGCCCTGGC GAAGGGAAAT
TCACATCAAA CCATGCTGGT GGAGGTGGCT AAAGCATGA
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| Protein sequence | MKNIKSQGNG EQPAISRRHF IQASSALIAL PFVSSPATAQ ARAVTATENR PAEKVVQTCS
TFDCGGKCDI RAHVSDGIVT RISTRPDNAL DAQMPVMRAC VRGRAYRKFV YHPDRLKYPM
KRVGKRGEGK FERISWDEAT TLIADNLKSI TEKYGPASRY VHVGTAVSGG TFSGDKMARR
LLNLTGGYLE SYHSVSMGNT AAATPYTYGI AASGSSLDTL LDTKLVILWG HNPTETIFGH
TNYFLQKMKQ NGTRFIVVDP RYSDTVSSLA DQWIPLLPTT DNALMDAMMY VIISENLHDR
AFIARYAIGF DEDSMPEGVP ANESLVAYLT GAKDGVVKSP EWAEKITHVP AQTIRQLARD
YANTKPAALI QGWGPQRHNC GERTARGSTL LATITGNVGI KGGWAAGYGG CANRKFAAGP
EMPDNPVKAK ISVMNWVQAA DDASKVTPDM GLKDADKLDS NIRILFSLAG NYLANQNPDL
HLAVRVLEDE SKIQFIVASD LFMTPSAKYA DLLLPETSFM ERWNIGETWG TASYLILSEK
LIEPEFERRS DYDWLREVAA KLGIENEFSQ GRDEKAWIEH IWEQTRLAMP DENLPDFATL
QKTRQHLFKS APFIAFEDNI RDPENHPFPT PSGKIEIFSK RLYDMQHPEI PALSHYVPAH
EGPEDALAKD FPLQLITWKG KNRANSTQYA NPWLIEVQQQ TLWINPQDAQ KRGITHGDMV
RIHNSRGICE IPAEVTPRII PGVVAMQAGA WWQPDENGID KGGCANVLSS ARITALAKGN
SHQTMLVEVA KA
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