Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2720 |
Symbol | |
ID | 6485289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2658746 |
End bp | 2659912 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642738049 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_002041783 |
Protein GI | 194444721 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.564025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAC AAATTGTCAC ACCTGAAAGC AGTACCCCGG TAGTTCTTAA CAACGAAACA AAAATCAACC TGCTGGATCT CAACCGTCAG CAGATGCGCG AGTTTTTTAA AAACTTAGGT GAAAAGCCTT TCCGCGCCGA TCAGGTGATG AAATGGATGT ATCACTATTG CTGCGATAAT TTTGATGAGA TGACCGACAT CAACAAAGTG TTGCGCGGCA AATTAAAAGA GGTCGCGGAA ATCCGCGCGC CGGAGGTCGT TGAAGAGCAG CGTTCCTCAG ACGGCACCAT CAAGTGGGCG ATTGCTGTCG GCGATCAGCG CGTTGAAACG GTCTATATCC CGGAAGACGA CCGCGCTACG CTGTGTGTCT CTTCACAGGT AGGATGCGCG CTGGAGTGCA AGTTTTGTTC AACTGCGCAG CAGGGCTTTA ACCGCAACCT GCGCGTATCG GAAATTATCG GTCAGGTCTG GCGTGCGGCG AAAATCGTCG GCGCGGCCAA AGTCACCGGC CAGCGTCCGA TCACCAACGT GGTCATGATG GGGATGGGCG AGCCATTGCT TAACCTGACC AATGTCGTAC CGGCGATGGA AATTATGCTC GATGACTTTG GTTTCGGCCT GTCCAAACGT CGTGTCACGC TCTCAACGTC CGGCGTGGTG CCTGCGCTGG ATAAACTGGG CGATATGATA GATGTCGCGC TGGCTATCTC CTTACATGCG CCGAATGACA CTATTCGCGA CGAAATCGTC CCGATCAACA AAAAATACAA TATCGAAACG TTCCTGGGCG CGGTTCGCCG CTATCTGGAG AAATCCAACG CCAATCAGGG GCGCGTGACG ATTGAATACG TGATGCTTGA CCACGTTAAC GACGGCACTG AACACGCGCA TCAACTGGCG GAGCTACTAA AAGAGACGCC TTGTAAGATT AATCTGATTC CGTGGAACCC GTTCCCTGGC GCGCCGTATG GCCGCAGCTC TAACAGCCGT ATCGATCGCT TTTCTAAGGT TTTGATGAGT TATGGTTTCA CGACCATCGT ACGCAAGACG CGTGGCGATG ACATTGATGC GGCATGCGGA CAGTTGGCTG GCGATGTGAT TGACCGTACC AAACGTACCC TGCGTAAGCG TATGCAGGGA GAGGTGATTG ACATCAAGGC TATTTGA
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Protein sequence | MSEQIVTPES STPVVLNNET KINLLDLNRQ QMREFFKNLG EKPFRADQVM KWMYHYCCDN FDEMTDINKV LRGKLKEVAE IRAPEVVEEQ RSSDGTIKWA IAVGDQRVET VYIPEDDRAT LCVSSQVGCA LECKFCSTAQ QGFNRNLRVS EIIGQVWRAA KIVGAAKVTG QRPITNVVMM GMGEPLLNLT NVVPAMEIML DDFGFGLSKR RVTLSTSGVV PALDKLGDMI DVALAISLHA PNDTIRDEIV PINKKYNIET FLGAVRRYLE KSNANQGRVT IEYVMLDHVN DGTEHAHQLA ELLKETPCKI NLIPWNPFPG APYGRSSNSR IDRFSKVLMS YGFTTIVRKT RGDDIDAACG QLAGDVIDRT KRTLRKRMQG EVIDIKAI
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