| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2682 |
|---|
| Symbol | dapA |
|---|
| ID | 6486269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2601384 |
|---|
| End bp | 2602262 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642738014 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_002041748 |
|---|
| Protein GI | 194445426 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.958571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 78 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACGG GAAGTATTGT CGCGCTTGTT ACGCCGATGG ATGAGAAAGG TAACGTCAGT
AGGTCTTGCC TGAAAAAACT CATTGATTAT CATGTCGCCA ACGGTACCTC GGCGATTGTT
TCGGTTGGCA CCACCGGCGA GTCTGCCACG CTAAGCCATG ATGAACATGG CGATGTCGTG
ATGATGACGC TGGAACTGGC TGACGGACGT ATTCCGGTTA TCGCCGGCAC GGGCGCAAAC
GCGACCGCGG AAGCGATTAG CCTGACGCAG CGTTTTAACG ATAGCGGCAT TGTTGGCTGC
CTGACGGTAA CGCCGTACTA CAATCGCCCC ACGCAGGAAG GTTTGTTCCA GCATTTCAAA
GCCATCGCGG AACACACTGA CTTGCCGCAA ATTCTGTATA ATGTGCCGTC CCGTACCGGT
TGCGACATGT TGCCGGAAAC CGTGGGTCGT CTGGCGGAAA TAAAAAATAT TATCGCTATC
AAAGAGGCGA CAGGGAACTT AACCCGCGTT CACCAGATCA AAGAGCTGGT TTCAGACGAT
TTTATTCTGC TTAGCGGCGA TGACGCGTCT GCGCTGGACT TTATGCAACT GGGTGGTCAT
GGCGTGATTT CCGTTACGGC TAACGTAGCG GCGCGCGAGA TGGCTGACAT GTGCAAACTG
GCGGCGGAAG GGCAATTTGC CGAGGCGCGC GCTATCAACC AGCGTCTGAT GCCGTTACAC
AACAAACTAT TTGTCGAACC CAATCCTATC CCGGTGAAAT GGGCATGTAA GGCATTGGGT
CTTGTGGCGA CCGACACGCT GCGCCTGCCA ATGACGCCTA TCACGGACCA TGGTCGTGAT
ATCGTCAAAG CAGCGCTTCA GCATGCTGGC CTGCTGTAA
|
|---|
| Protein sequence | MFTGSIVALV TPMDEKGNVS RSCLKKLIDY HVANGTSAIV SVGTTGESAT LSHDEHGDVV
MMTLELADGR IPVIAGTGAN ATAEAISLTQ RFNDSGIVGC LTVTPYYNRP TQEGLFQHFK
AIAEHTDLPQ ILYNVPSRTG CDMLPETVGR LAEIKNIIAI KEATGNLTRV HQIKELVSDD
FILLSGDDAS ALDFMQLGGH GVISVTANVA AREMADMCKL AAEGQFAEAR AINQRLMPLH
NKLFVEPNPI PVKWACKALG LVATDTLRLP MTPITDHGRD IVKAALQHAG LL
|
|---|
| |