| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2674 |
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| Symbol | acrD |
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| ID | 6486399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2590988 |
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| End bp | 2594101 |
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| Gene Length | 3114 bp |
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| Protein Length | 1037 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642738006 |
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| Product | aminoglycoside/multidrug efflux system |
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| Protein accession | YP_002041740 |
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| Protein GI | 194445019 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAATT TTTTTATCGA TCGCCCCATT TTTGCCTGGG TGCTGGCTAT CCTGTTGTGT
CTGACAGGGG CGTTAGCCAT TTTCTCTTTA CCTGTTGAAC AATATCCCGA TCTGGCGCCG
CCCAACGTAC GTATTACCGC GAATTATCCG GGAGCGTCGG CACAAACGCT GGAAAATACC
GTAACCCAGG TTATTGAGCA GAATATGACG GGCCTCGATA ATCTGATGTA CATGTCATCA
CAAAGCAGCG GAACCGGACA GGCGACCATC ACCCTGAGCT TTATTGCGGG AACCGATCCT
GATGAGGCGG TTCAGCAGGT GCAAAACCAG TTACAGTCCG CGATGCGTAA ACTGCCGCAG
GCGGTACAGG ATCAAGGCGT CACGGTACGC AAAACGGGCG ATACCAATAT TTTGACCATC
GCTTTCGTCT CTACCGACGG TTCTATGGAC AAGCAGGATA TCGCCGACTA CGTCGCCAGT
AATATTCAGG ACCCGCTCAG CCGCGTCAAC GGTGTCGGCG ATATTGACGC TTACGGTTCA
CAGTACTCTA TGCGTATCTG GCTCGATCCT GCCAAATTGA ATAGTTTTCA GATGACCACG
AAAGACGTGA CCGATGCGAT TGAGTCGCAG AATGCGCAAA TCGCCGTCGG GCAGCTTGGC
GGTACGCCTT CGGTCGACAA GCAGGCGCTG AACGCCACCA TTAATGCGCA GTCGCTGCTG
CAAACGCCGC AACAATTTCG CGATATCACC CTGCGCGTTA ATCAGGACGG TTCCGAGGTC
AAACTGGGCG ATGTCGCCAC CGTGGAGCTG GGGGCGGAAA AGTATGACTA CCTCAGCCGT
TTTAACGGCA ATCCGGCTTC CGGTCTTGGC GTTAAGCTGG CCTCCGGCGC GAACGAAATG
GCGACCGCGA AGCTGGTGCT GGATCGCCTC AACGAGCTGG CGCAGTACTT CCCTCACGGC
CTGGAATACA AGATCGCGTA TGAAACCACC TCCTTTGTCA AAGCCTCGAT TATCGATGTG
GTCAAAACGT TGCTGGAAGC TATCGCGCTG GTTTTCCTGG TGATGTACCT GTTCCTGCAA
AACTTTCGCG CCACGCTCAT TCCGACGATC GCCGTGCCGG TAGTATTAAT GGGCACCTTC
TCCGTGCTTT ACGCGTTCGG CTACAGTATT AACACATTAA CCATGTTCGC GATGGTGCTG
GCGATCGGGC TCCTGGTCGA CGATGCCATC GTGGTGGTGG AAAACGTCGA ACGTATCATG
AGCGAAGAAG GGCTCACGCC GCGTGAAGCG ACGCGCAAAT CCATGGGACA AATCCAGGGG
GCGCTGGTCG GTATCGCGAT GGTGCTGTCT GCGGTATTCG TGCCGATGGC GTTCTTTGGC
GGTACCACCG GGGCGATTTA TCGTCAGTTT TCTATCACCA TTGTCTCGGC AATGGTGCTG
TCGGTGCTGG TCGCCATGAT CCTGACACCG GCGCTGTGCG CAACGTTATT AAAACCGCTG
CACAAAGGCG AACAACACGG GCAACGCGGA TTTTTCGGCT GGTTTAACCG TACCTTCAAT
CGTAATGCCG AACGTTATGA GAAAGGCGTA GCGAAAATTT TGCATCGCAG CCTGCGCTGG
ATTCTGATTT ATGTTCTGTT GCTTGGCGGC ATGGTGTTCC TGTTTTTGCG TCTCCCCACC
TCCTTTCTAC CGCAGGAAGA TCGGGGCATG TTCACTACGT CTATCCAGCT ACCGAGCGGT
TCTACGCAAC AGCAGACCCT GAAAGTCGTT GAAAAGGTTG AAAACTATTA CTTCACCCAT
GAGAAAGACA ACATTATGTC GGTCTTCTCG ACGGTCGGTT CCGGCCCTGG CGGGAATGGG
CAAAACGTCG CGCGCATGTT TGTTCGCTTG AAAGACTGGG ACGCGCGCGA TCCCACCACC
GGCTCCTCGT TCGCCATTAT TGAGCGGGCG ACAAAAGCGT TTAACCAGAT TAAAGAAGCT
CGCGTCTTCG CCAGCAGCCC GCCGGCAATT AGCGGTCTGG GCAGCTCTGC CGGTTTTGAT
ATGGAATTAC AGGATCACGC CGGAGCAGGC CATGACGCGC TGATGGCCGC ACGAGATCAA
CTCATTGAGC TGGCCGGGAA AAACAGTTCC TTGACCCGCG TGCGCCACAA CGGCCTGGAC
GACAGCCCGC AACTGCAAAT TGATATTGAC CAACGGAAAG CGCAGGCGCT GGGCGTATCG
ATTGACGATA TCAACGACAC CCTGCAAACA GCCTGGGGGT CGAGCTACGT CAACGACTTC
ATGGACCGGG GCCGCGTGAA GAAGGTCTAT GTTCAGGCCG CAGCGAAATA TCGTATGTTG
CCGGATGATA TTAATCTTTG GTATGTCCGT AACAAAGAGG GCGGCATGGT CCCCTTCTCC
GCCTTCGCCA CCTCGCGCTG GGAAACCGGA TCGCCGCGTC TGGAACGCTA TAACGGCTAT
TCGGCGGTAG AAATTGTCGG AGAGGCCGCG CCGGGGGTCA GTACCGGGAC GGCGATGGAT
GTCATGGAGT CGTTGGTGCA TCAGCTACCG GGCGGTTTTG GCCTGGAATG GACAGCCATG
TCTTACCAGG AACGGCTCTC CGGCGCGCAG GCGCCTGCGC TGTACGCTAT TTCGCTATTA
GTCGTCTTCC TGTGTCTGGC GGCATTGTAT GAAAGCTGGT CGGTGCCCTT CTCGGTGATG
CTGGTTGTGC CGCTCGGCGT CATTGGCGCG CTACTCGCTA CCTGGATGCG CGGGCTGGAA
AACGATGTTT ACTTCCAGGT GGGGCTGTTG ACCGTTATCG GCCTCTCGGC GAAAAACGCG
ATTCTGATTG TGGAATTCGC CAACGAAATG AATCAGAAGG GACACGCGCT GTTAGACGCC
ACGCTGTACG CCAGCCGCCA GCGCCTGCGA CCGATACTGA TGACTTCGCT GGCGTTTATC
TTTGGCGTAT TGCCGATGGC CACCAGCACC GGGGCAGGCT CGGGTAGCCA ACATGCTGTC
GGAACCGGCG TGATGGGGGG AATGATCTCA GCAACCATTC TGGCTATCTT CTTTGTACCC
CTGTTTTTCG TGCTGATACG CCGCCGCTTC CCGCTGAAGC CGCGCCCGGA ATAA
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| Protein sequence | MANFFIDRPI FAWVLAILLC LTGALAIFSL PVEQYPDLAP PNVRITANYP GASAQTLENT
VTQVIEQNMT GLDNLMYMSS QSSGTGQATI TLSFIAGTDP DEAVQQVQNQ LQSAMRKLPQ
AVQDQGVTVR KTGDTNILTI AFVSTDGSMD KQDIADYVAS NIQDPLSRVN GVGDIDAYGS
QYSMRIWLDP AKLNSFQMTT KDVTDAIESQ NAQIAVGQLG GTPSVDKQAL NATINAQSLL
QTPQQFRDIT LRVNQDGSEV KLGDVATVEL GAEKYDYLSR FNGNPASGLG VKLASGANEM
ATAKLVLDRL NELAQYFPHG LEYKIAYETT SFVKASIIDV VKTLLEAIAL VFLVMYLFLQ
NFRATLIPTI AVPVVLMGTF SVLYAFGYSI NTLTMFAMVL AIGLLVDDAI VVVENVERIM
SEEGLTPREA TRKSMGQIQG ALVGIAMVLS AVFVPMAFFG GTTGAIYRQF SITIVSAMVL
SVLVAMILTP ALCATLLKPL HKGEQHGQRG FFGWFNRTFN RNAERYEKGV AKILHRSLRW
ILIYVLLLGG MVFLFLRLPT SFLPQEDRGM FTTSIQLPSG STQQQTLKVV EKVENYYFTH
EKDNIMSVFS TVGSGPGGNG QNVARMFVRL KDWDARDPTT GSSFAIIERA TKAFNQIKEA
RVFASSPPAI SGLGSSAGFD MELQDHAGAG HDALMAARDQ LIELAGKNSS LTRVRHNGLD
DSPQLQIDID QRKAQALGVS IDDINDTLQT AWGSSYVNDF MDRGRVKKVY VQAAAKYRML
PDDINLWYVR NKEGGMVPFS AFATSRWETG SPRLERYNGY SAVEIVGEAA PGVSTGTAMD
VMESLVHQLP GGFGLEWTAM SYQERLSGAQ APALYAISLL VVFLCLAALY ESWSVPFSVM
LVVPLGVIGA LLATWMRGLE NDVYFQVGLL TVIGLSAKNA ILIVEFANEM NQKGHALLDA
TLYASRQRLR PILMTSLAFI FGVLPMATST GAGSGSQHAV GTGVMGGMIS ATILAIFFVP
LFFVLIRRRF PLKPRPE
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