Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2672 |
Symbol | |
ID | 6485460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2586956 |
End bp | 2588917 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642738004 |
Product | putative oxidoreductase Fe-S binding subunit |
Protein accession | YP_002041738 |
Protein GI | 194443862 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases [COG1142] Fe-S-cluster-containing hydrogenase components 2 |
TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGTT TTATTATGGC CAATAGCCAG CAGTGTCTGG GATGCCATGC CTGCGAGGTC GCCTGCGTAA TGGCTCACAA TGATGAGCGA CATGTCCTGA CGCCACAGCG CTATCAGCCC CGAATTACTG TCATCAAACA TCAGCACCAG CGCAGCGCGG TCACATGTCA CCATTGCGAA GATGCGCCCT GCGCCCGTAG CTGTCCGAAC GGCGCGATCG CGCATATTAA CGACAGCGTG CAGGTCAATG CGCAGAAGTG CATCGGCTGT AAATCCTGCG TCGTCGCCTG CCCATTCGGC ACCATGCAGA TGGTATTGAC GCCCGTCGCG CCAAACCAGT TCAAAGCCAG CGCGCATAAA TGCGATCTGT GTCAGGGACG TGAACAGGGT CCGGCCTGTG TGGAAAATTG CCCGGCGGAT GCGCTGCAAC TGGTCACCGA AGACTCGTTG ACCCGTCTGG CTAAAACGCG ACGGCTGCGT ACCGCCCGGC AGGAGATTCG CCCCTGGCAT ACCGTGGATA CACAACACAG TGGGACAGCA AGCAGCAAAG TCGAGCGTAT GCAGGCGACG CCGCCGCGCG GCGAACCGGA TAAACTGGCG ATTGAAGCGC GTAAAACCAC CTTTGAGGAA ATTTATCTGC CGTTTCGCGC CGCGCAGGCG GAGCGTGAAG CGTCCCGCTG CCTCACATGC GGGGAACACA GTATCTGCGA ATGGACCTGT CCGCTGCATA ACCATATTCC CCAGTGGATC GAACTGGTGA AAGCTGGCGA TATTGATGCG GCGGTAGAGC TTTCTCACCA GACCAACTGC CTGCCGGAAA TTACCGGGCG CGTTTGTCCG CAGGACCGGC TATGCGAAGG CGCGTGTACA CTCCGCGATG AGTATGGCGC GGTTACCATC GGCAACATTG AGCGCTATAT CTCCGATCGC GCTCTGAGCA AAGGCTGGCG TCCCGACCTG TCGGACGTAC AGAAGAGCGA CAAGCGCGTG GCGATTATCG GCGCGGGGCC GGCAGGTCTT GCCTGCGCTG ACGTGCTGGC GCGTCACGGC GTAAGCGCCA CCGTCTACGA TCGCCATCCG GAAATCGGCG GTTTGCTCAC CTTTGGTATT CCGGCTTTCA AACTGGATAA ATCTCTGCTG GCGCGCCGTC GGGAAATCTT CAGCGCGATG GGGATTCGTT TTGAGCTTAA CTGCGAAGTG GGGAAAGATA TTTCTCTGGA GACGCTGCTG GAAAGTTATG ACGCCGTCTT TGTCGGGGTA GGAACCTATC GTTCCATGAA GGCTGATTTA CCGAATGAAG ACGCGCCGGG GGTATATGAT GCGTTGCCAT TCCTCATCGC CAATACCAAA CAGGTGATGG GGCTTCCGGC GTTGCCTGAC GAGCCGTTTA TTGATACTGC GGGCCTTAAC GTGGTTGTGC TGGGCGGCGG TGACACCGCA ATGGACTGCG TACGTACGGC GCTGCGTCAT GGCGCTGCTA ACGTCACCTG CGCTTATCGC CGCGATGAGG CCAATATGCC GGGGTCGAAA AAAGAGGTGA AAAACGCGCG GGAAGAGGGC GCGAACTTTG AATTTAACGT TCAGCCGGTT GAGTTGGTGC TGGATACGCA CGGGCGCGCC AGCGGTATTC GCTTTTTGCG TACGCGGCTT GGCGAACCGG ATGGTCAGGG GCGACGCCGC CCGGTACCTG TACCGGACAG CGAGTTCGTG ATGCCGGCGG ATGCGGTCAT TATGGCGTTT GGTTTTCATC CGCATGGTAT GTCGTGGCTC GAATCGCATG GCGTGAAGGT GGATAACTGG GGACGTATTG CCGCCAGCGT CGAGAGCGAG TTTCGTTACC AGACGTCCAA CCCGAAAATT TTCGCCGGCG GCGATGCGGT GCGCGGCGCC GATCTGGTGG TGACGGCGAT GGCAGAAGGC CGACATGCTG CGCAGGGGAT ACTCGACTGG TTAGCTAAAT AA
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Protein sequence | MNRFIMANSQ QCLGCHACEV ACVMAHNDER HVLTPQRYQP RITVIKHQHQ RSAVTCHHCE DAPCARSCPN GAIAHINDSV QVNAQKCIGC KSCVVACPFG TMQMVLTPVA PNQFKASAHK CDLCQGREQG PACVENCPAD ALQLVTEDSL TRLAKTRRLR TARQEIRPWH TVDTQHSGTA SSKVERMQAT PPRGEPDKLA IEARKTTFEE IYLPFRAAQA EREASRCLTC GEHSICEWTC PLHNHIPQWI ELVKAGDIDA AVELSHQTNC LPEITGRVCP QDRLCEGACT LRDEYGAVTI GNIERYISDR ALSKGWRPDL SDVQKSDKRV AIIGAGPAGL ACADVLARHG VSATVYDRHP EIGGLLTFGI PAFKLDKSLL ARRREIFSAM GIRFELNCEV GKDISLETLL ESYDAVFVGV GTYRSMKADL PNEDAPGVYD ALPFLIANTK QVMGLPALPD EPFIDTAGLN VVVLGGGDTA MDCVRTALRH GAANVTCAYR RDEANMPGSK KEVKNAREEG ANFEFNVQPV ELVLDTHGRA SGIRFLRTRL GEPDGQGRRR PVPVPDSEFV MPADAVIMAF GFHPHGMSWL ESHGVKVDNW GRIAASVESE FRYQTSNPKI FAGGDAVRGA DLVVTAMAEG RHAAQGILDW LAK
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