Gene SNSL254_A2617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2617 
Symbol 
ID6484371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp2535807 
End bp2536733 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content56% 
IMG OID642737950 
ProductOsmT protein 
Protein accessionYP_002041684 
Protein GI194445013 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATT CACTGCGTCA ACTGCGTATT TTTATTACCG TCGCCCAGGC CAAAAGTTTC 
AGTCGGGCAG GGGACAGGAT TGGACTGAGC CAGTCTGCGG TCAGTCATAG CGTAAAAGAG 
CTGGAGCGGC AAACCGGCGT CAGACTGTTG GATCGCACTA CGCGTGAGGT GGTGCTGACC 
GAGGCGGGGC AACAACTGGC GACGCGTCTG GAGCGGGTGC TTGATGAACT GAACAGCATA 
CTGCGCGATG CAGGCAGAGT AGGGACACAA TTAACCGGCA CCGTGCGCGT TGCCGCGAGC 
CAAACCATTT CTGCGCATCT TATTCCGCAA TGCATTGCCC AAAGTAATTC ACTTTATCCC 
GCTATTGATT TTGTATTGCA CGATCGTCCG CAGCAGTGGG TGCTGGAGAG CATCCGCCAG 
GGTGAAGTGG ATTTTGGCAT CGTTATCGAT CCCGGCGCAG CGGTGGATTT ACAGTGTGAA 
GCCATCTTAT CAGAGCCTTT TTTACTGTTG TGTCGCCAGG ATCATCCGCT GGCGCATCAG 
GAATGGGTGA GCTGGCAGGA TCTTAAACAG GCCTCGCTGG TCTTACAGGA TTATGCTTCC 
GGCAGTCGAC CGCTGATTGA TGCGGCGCTG GCCCATTTTG CTATTGAGGC GGATATCGTG 
CAGGAGATTG GTCACCCGGC CACGCTGTTT CCAATGGTGG AAGCGGGAAT CGGCATCAGC 
GTGCTGCCCG CGCTGGCGTT ACCGCTCCCG CAGGGCAGCC ACTTACAGGT TAAACGGCTG 
ACGCCCGTAG TTGAAAGGCA GCTCATGCTG GCGCGGCGAA AAAACCGATC GCTCTCCACG 
GCGGCGCAGG CGTTGTGGGA CGTGGTGCGT ACTCAGGCCA GCGAATTAAC CGCCGCGAGG 
GTGAAAGATC CGCTGTATCA GCTATAA
 
Protein sequence
MNYSLRQLRI FITVAQAKSF SRAGDRIGLS QSAVSHSVKE LERQTGVRLL DRTTREVVLT 
EAGQQLATRL ERVLDELNSI LRDAGRVGTQ LTGTVRVAAS QTISAHLIPQ CIAQSNSLYP 
AIDFVLHDRP QQWVLESIRQ GEVDFGIVID PGAAVDLQCE AILSEPFLLL CRQDHPLAHQ 
EWVSWQDLKQ ASLVLQDYAS GSRPLIDAAL AHFAIEADIV QEIGHPATLF PMVEAGIGIS 
VLPALALPLP QGSHLQVKRL TPVVERQLML ARRKNRSLST AAQALWDVVR TQASELTAAR 
VKDPLYQL