| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2568 |
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| Symbol | mnmC |
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| ID | 6485782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2488966 |
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| End bp | 2490966 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642737903 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_002041644 |
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| Protein GI | 194442884 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.580805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACAAT ACGCCATACA ACCCGCCACA CTCGAATTTA ACGCTGAGGG TACACCTGTT
TCCCGAGATT TTGATGATGT CTATTTTTCT AATGACAATG GACTCGAAGA GACACGCTAC
GTTTTTCTTG GCGGCAATCG TCTTACGGAG CGATTTCCCG TACATTCACA TCCATTATTT
ATAGTCGCGG AAAGCGGTTT TGGCACCGGA CTCAACTTCC TGACGCTGTG GCAGGCGTTT
GACAGCTTTC GTTCTGCGCA CCCACAGGCG ACGCTGCAAA GGTTACATTT CATCAGTTTT
GAGAAATTCC CGTTAACGCG CGACGATCTG GCGCTGGCGC ACCAACACTG GCCGGAGCTC
GCGCCCTGGG CAGAGCAGCT GCAGGCGCAA TGGCCGCTGC CGCTCCCGGG GTGCCACCGA
CTATTGCTGG ATCGGAGCCG GGTGACGCTG GATTTGTGGT TTGGCGATAT TAATGAGCTG
ACCGACCAAC TGGACGCCAC GCTGAATCAA ACAGTCGACG CCTGGTTCCT CGACGGTTTT
GCCCCGGCTA AAAATCCGGA TATGTGGACG CCAAACCTGT TTAACGCGAT GGCGCGGCTG
GCGCGGCCCG GCGCAACGCT GGCGACGTTT ACCTCGGCGG GCTTCGTTCG TCGGGGATTA
CAGGAAGTCG GTTTTACCAT GCAAAAACGC AAAGGCTTCG GGCGTAAACG CGAGATGCTT
TGTGGAGTGA TGGAACAACA CCTCATGCCG ACCCTTTCCG CGCCCTGGTT TTACCGCAGT
GGAAGCGAAA AACGTGAAAC GGCGATCATT GGCGGCGGCA TTGCCAGCGC GCTGTTATCA
CTGGCGTTAC TGCGTCGCGG CTGGCAGGTG ACGCTCTATT GCGCAGATGA TCAGCCCGCC
CAGGGCGCTT CCGGTAATCG ACAGGGCGCG CTTTATCCGC TCCTTAGCAA ACATGACGCC
GCCATTAATC GCTTTTTCCC GACCGCATTC ACCTTTGCCC GTCGCCTGTA TGATGCCCTG
CCCGTCTCTT TTGATCATGA CTGGTGCGGC GTAACGCAGC TCGGATGGGA TGAGAAAAGC
CAGCAGAAAA TTGCCCAGAT GCTGTCCCTG GCGCTGCCCG CCGGACTGGC CTCGGCGCTC
AATGCCGAAG AGGCGGAACA GGCGGTTGGC GTGACGACAC GCTGCGGAGG AATTACCTAT
CCGGCAGGCG GCTGGCTGTG CCCGGAACAA TTAACTCGCG CAGTCATCGC ACTGGCGACC
GAACAGGGTT TACAAACGCG CTTTCGCCAT ACGCTCACGT CGCTCGTTGC GCAGGAGTCG
CGCTGGCAAC TGCGCTTTAC GTCAGGTGAA ACCGCCAGCC ATGAGACCGT CGTTCTGGCG
AACGGCCATC AGATTAACCG TTTTGATCAG ACCCAGCCGC TGCCGGTGTA TGCCGTCGGG
GGGCAGGTCA GTCATATTCC CACCACCCCC GCTCTCTCGG CGTTGCGTCA GGTGTTATGC
TACGACGGCT ATCTGACGCC GCAAAATCCG CATAATCAGC AGCACTGTAT TGGCGCCAGC
TATCACCGGG GTGACGAAAG CACCGTCTGG CGCGAAGAAG ATCAGCGTCA GAACCGACAG
CGTCTGCTTG ACTGTTTTCC GGATGCGAAA TGGGCCACAG AGGTTGACGT CAGCGGCAAC
AGCGCCCGTT GCGGCGTGCG TTGCGCCACC CGCGACCATC TGCCGATGGT GGGCAATGTC
CCGGATTACC ACGCCACGCT GACGCATTAC GCCGATTTAG CCGATAATAA AACGTCGGCG
GCGCCTGCGC CTGTGTATCC GGGTTTATTT ATGCTCGGCG CGCTGGGATC GCGCGGTTTG
TGCTCAGCGC CATTATGCGC AGAAATTCTG GCGGCGCAGA TGAGTAACGA GCCGATTCCA
CTGGATGCCG GTACGCTGGC GGCGTTAAAT CCAAATCGGT TATGGGTGAG AAAGTTATTG
AAGGGAAAAG CGGTGAAGTA A
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| Protein sequence | MKQYAIQPAT LEFNAEGTPV SRDFDDVYFS NDNGLEETRY VFLGGNRLTE RFPVHSHPLF
IVAESGFGTG LNFLTLWQAF DSFRSAHPQA TLQRLHFISF EKFPLTRDDL ALAHQHWPEL
APWAEQLQAQ WPLPLPGCHR LLLDRSRVTL DLWFGDINEL TDQLDATLNQ TVDAWFLDGF
APAKNPDMWT PNLFNAMARL ARPGATLATF TSAGFVRRGL QEVGFTMQKR KGFGRKREML
CGVMEQHLMP TLSAPWFYRS GSEKRETAII GGGIASALLS LALLRRGWQV TLYCADDQPA
QGASGNRQGA LYPLLSKHDA AINRFFPTAF TFARRLYDAL PVSFDHDWCG VTQLGWDEKS
QQKIAQMLSL ALPAGLASAL NAEEAEQAVG VTTRCGGITY PAGGWLCPEQ LTRAVIALAT
EQGLQTRFRH TLTSLVAQES RWQLRFTSGE TASHETVVLA NGHQINRFDQ TQPLPVYAVG
GQVSHIPTTP ALSALRQVLC YDGYLTPQNP HNQQHCIGAS YHRGDESTVW REEDQRQNRQ
RLLDCFPDAK WATEVDVSGN SARCGVRCAT RDHLPMVGNV PDYHATLTHY ADLADNKTSA
APAPVYPGLF MLGALGSRGL CSAPLCAEIL AAQMSNEPIP LDAGTLAALN PNRLWVRKLL
KGKAVK
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